Information for 7-GCACTSTKGCTCC (Motif 6)

A C T G A G T C C G T A A G T C A C G T A T G C A C G T A C T G A C T G A T G C A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G G T C A A T C G A G T C G T A C C G T A A T C G C G T A A C T G A C G T A C T G A G T C
p-value:1e-10
log p-value:-2.506e+01
Information Content per bp:1.915
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 17.9bp
Average Position of motif in Background76.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.61
Offset:8
Orientation:forward strand
Alignment:GCACTSTKGCTCC-
--------GCTCCG
 A C T G A G T C C G T A A G T C A C G T A T G C A C G T A C T G A C T G A T G C A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------GCACTSTKGCTCC
NNNNTGAGCACTGTNNG---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C G T A T G C A C G T A C T G A C T G A T G C A C G T A G T C A G T C
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCACTSTKGCTCC-----
-NNNNTTGGCGCCGANNN
 A C T G A G T C C G T A A G T C A C G T A T G C A C G T A C T G A C T G A T G C A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GCACTSTKGCTCC
--GCTCGGSCTC-
 A C T G A G T C C G T A A G T C A C G T A T G C A C G T A C T G A C T G A T G C A C G T A G T C A G T C
A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GCACTSTKGCTCC
MRSCACTYAA-----
 A C G T A C G T A C T G A G T C C G T A A G T C A C G T A T G C A C G T A C T G A C T G A T G C A C G T A G T C A G T C
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCACTSTKGCTCC--
TGGACTTTGNNCTNTG
 A C G T A C T G A G T C C G T A A G T C A C G T A T G C A C G T A C T G A C T G A T G C A C G T A G T C A G T C A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

PB0113.1_E2F3_2/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GCACTSTKGCTCC-----
-NNNNTTGGCGCCGANNN
 A C T G A G T C C G T A A G T C A C G T A T G C A C G T A C T G A C T G A T G C A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

E2F1/MA0024.3/Jaspar

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GCACTSTKGCTCC---
----TTTGGCGCCAAA
 A C T G A G T C C G T A A G T C A C G T A T G C A C G T A C T G A C T G A T G C A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

HNF4G/MA0484.1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GCACTSTKGCTCC-
TGGACTTTGNNCTCN
 A C G T A C T G A G T C C G T A A G T C A C G T A T G C A C G T A C T G A C T G A T G C A C G T A G T C A G T C A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

Hnf4a/MA0114.3/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GCACTSTKGCTCC
ATTGGACTTTGACCCC
 A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C G T A T G C A C G T A C T G A C T G A T G C A C G T A G T C A G T C
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C