Information for 4-AGTCCAATACAGC (Motif 3)

C G T A A C T G C G A T G A T C G T A C C G T A C T G A C G A T C T G A G T A C C G T A C T A G A T G C
Reverse Opposite:
A T C G A G T C A C G T A C T G A G C T C G T A A G C T C G A T C A T G C A T G C G T A A G T C A C G T
p-value:1e-21
log p-value:-4.931e+01
Information Content per bp:1.808
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.7 +/- 24.1bp
Average Position of motif in Background41.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------AGTCCAATACAGC
GGCAAAAGTCCAATAA---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G A T G A T C G T A C C G T A C T G A C G A T C T G A G T A C C G T A C T A G A T G C
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T A C G T A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGTCCAATACAGC-----
-TCNCTTTACAGCGNNNT
 C G T A A C T G C G A T G A T C G T A C C G T A C T G A C G A T C T G A G T A C C G T A C T A G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

Rhox11/MA0629.1/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGTCCAATACAGC-----
-TCNNTTTACAGCGNNNT
 C G T A A C T G C G A T G A T C G T A C C G T A C T G A C G A T C T G A G T A C C G T A C T A G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGTCCAATACAGC-----
-TCNNTTTACAGCGNNNT
 C G T A A C T G C G A T G A T C G T A C C G T A C T G A C G A T C T G A G T A C C G T A C T A G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:AGTCCAATACAGC
-------CACAGN
 C G T A A C T G C G A T G A T C G T A C C G T A C T G A C G A T C T G A G T A C C G T A C T A G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.54
Offset:9
Orientation:forward strand
Alignment:AGTCCAATACAGC-
---------CAGCC
 C G T A A C T G C G A T G A T C G T A C C G T A C T G A C G A T C T G A G T A C C G T A C T A G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

HOXB13/MA0901.1/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AGTCCAATACAGC
---CCAATAAAAC
 C G T A A C T G C G A T G A T C G T A C C G T A C T G A C G A T C T G A G T A C C G T A C T A G A T G C
A C G T A C G T A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C

HOXA13/MA0650.1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AGTCCAATACAGC
---CCAATAAAAA
 C G T A A C T G C G A T G A T C G T A C C G T A C T G A C G A T C T G A G T A C C G T A C T A G A T G C
A C G T A C G T A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

BCL6B/MA0731.1/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---AGTCCAATACAGC-
TGAATTCCTAGAAAGCA
 A C G T A C G T A C G T C G T A A C T G C G A T G A T C G T A C C G T A C T G A C G A T C T G A G T A C C G T A C T A G A T G C A C G T
A C G T A C T G C T G A C T G A A C G T A G C T A G T C A G T C A C G T T G C A A C T G G T C A C G T A C G T A C T A G G A T C C T G A

PH0057.1_Hoxb13/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:AGTCCAATACAGC---
AACCCAATAAAATTCG
 C G T A A C T G C G A T G A T C G T A C C G T A C T G A C G A T C T G A G T A C C G T A C T A G A T G C A C G T A C G T A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G