Information for 5-GATGGCAGCA (Motif 2)

A T C G C T G A C A G T A T C G T C A G G A T C C G T A T A C G A T G C G C T A
Reverse Opposite:
C G A T T A C G A T G C C G A T C T A G A G T C T A G C G T C A G A C T T A G C
p-value:1e-24
log p-value:-5.555e+01
Information Content per bp:1.675
Number of Target Sequences with motif92.0
Percentage of Target Sequences with motif11.07%
Number of Background Sequences with motif1499.0
Percentage of Background Sequences with motif3.14%
Average Position of motif in Targets52.6 +/- 22.3bp
Average Position of motif in Background49.7 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GATGGCAGCA
CAAGATGGCGGC-
 A C G T A C G T A C G T A T C G C T G A C A G T A T C G T C A G G A T C C G T A T A C G A T G C G C T A
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T

PH0014.1_Cphx/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GATGGCAGCA--
ATGATCGAATCAAA
 A C G T A C G T A T C G C T G A C A G T A T C G T C A G G A T C C G T A T A C G A T G C G C T A A C G T A C G T
C T G A C G A T T C A G C G T A C A G T A T G C T A C G T G C A G T C A G A C T A G T C C G T A T C G A G C T A

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GATGGCAGCA---
---GGGAGGACNG
 A T C G C T G A C A G T A T C G T C A G G A T C C G T A T A C G A T G C G C T A A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

YY1/MA0095.2/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GATGGCAGCA
CAAGATGGCGGC-
 A C G T A C G T A C G T A T C G C T G A C A G T A T C G T C A G G A T C C G T A T A C G A T G C G C T A
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GATGGCAGCA---
ADGGYAGYAGCATCT
 A C G T A C G T A T C G C T G A C A G T A T C G T C A G G A T C C G T A T A C G A T G C G C T A A C G T A C G T A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GATGGCAGCA
GGTTGGCAT--
 A C G T A T C G C T G A C A G T A T C G T C A G G A T C C G T A T A C G A T G C G C T A
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GATGGCAGCA
---NGAAGC-
 A T C G C T G A C A G T A T C G T C A G G A T C C G T A T A C G A T G C G C T A
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GATGGCAGCA
-----CAGCC
 A T C G C T G A C A G T A T C G T C A G G A T C C G T A T A C G A T G C G C T A
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GATGGCAGCA-
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A C G T A C G T A T C G C T G A C A G T A T C G T C A G G A T C C G T A T A C G A T G C G C T A A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GATGGCAGCA-
-ATTGCATCAK
 A T C G C T G A C A G T A T C G T C A G G A T C C G T A T A C G A T G C G C T A A C G T
A C G T T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T