Information for 9-GTTTCACAAG (Motif 10)

A C T G A C G T A C G T A G C T A T G C C G T A T G A C C T G A C G T A C T A G
Reverse Opposite:
A G T C C G A T A G C T A C T G A C G T A T C G C T G A G T C A T G C A G T A C
p-value:1e-8
log p-value:-2.012e+01
Information Content per bp:1.837
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif62.7
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets58.1 +/- 28.1bp
Average Position of motif in Background51.9 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC13/MA0907.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GTTTCACAAG-
NTTTTACGAGN
 A C T G A C G T A C G T A G C T A T G C C G T A T G A C C T G A C G T A C T A G A C G T
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GTTTCACAAG
TGGTTTCAGT--
 A C G T A C G T A C T G A C G T A C G T A G C T A T G C C G T A T G A C C T G A C G T A C T A G
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GTTTCACAAG-
ATTGCACAATA
 A C T G A C G T A C G T A G C T A T G C C G T A T G A C C T G A C G T A C T A G A C G T
T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GTTTCACAAG--
--GTCACATGAY
 A C T G A C G T A C G T A G C T A T G C C G T A T G A C C T G A C G T A C T A G A C G T A C G T
A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GTTTCACAAG
CGGTTTCAAA--
 A C G T A C G T A C T G A C G T A C G T A G C T A T G C C G T A T G A C C T G A C G T A C T A G
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GTTTCACAAG----
ANATTTTACGAGNNNN
 A C G T A C G T A C T G A C G T A C G T A G C T A T G C C G T A T G A C C T G A C G T A C T A G A C G T A C G T A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTTTCACAAG
GTTGCGCAAT
 A C T G A C G T A C G T A G C T A T G C C G T A T G A C C T G A C G T A C T A G
T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTTTCACAAG
HTTTCCCASG
 A C T G A C G T A C G T A G C T A T G C C G T A T G A C C T G A C G T A C T A G
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTTTCACAAG
VTTRCATAAY
 A C T G A C G T A C G T A G C T A T G C C G T A T G A C C T G A C G T A C T A G
T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C

PH0068.1_Hoxc13/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTTTCACAAG----
NAATTTTACGAGNTNN
 A C G T A C G T A C T G A C G T A C G T A G C T A T G C C G T A T G A C C T G A C G T A C T A G A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T