Information for 6-AAAWGGCCNAAGMTTT (Motif 6)

C G T A C T G A C T G A C G T A A C T G A C T G A G T C G A T C G T C A G T C A C T G A A C T G G T A C A C G T C G A T A C G T
Reverse Opposite:
G T C A C G T A C G T A A C T G G T A C A G C T A C G T A C G T C A T G A C T G A G T C A G T C C G A T G A C T A G C T A C G T
p-value:1e-12
log p-value:-2.850e+01
Information Content per bp:1.762
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets72.3 +/- 28.6bp
Average Position of motif in Background53.7 +/- 18.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F3/MA0469.2/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAAWGGCCNAAGMTTT
AAAAATGGCGCCATTTTT
 A C G T A C G T C G T A C T G A C T G A C G T A A C T G A C T G A G T C G A T C G T C A G T C A C T G A A C T G G T A C A C G T C G A T A C G T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

E2F2/MA0864.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAAWGGCCNAAGMTTT
AAAATGGCGCCATTTT-
 A C G T C G T A C T G A C T G A C G T A A C T G A C T G A G T C G A T C G T C A G T C A C T G A A C T G G T A C A C G T C G A T A C G T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.56
Offset:9
Orientation:reverse strand
Alignment:AAAWGGCCNAAGMTTT
---------AAGCTTG
 C G T A C T G A C T G A C G T A A C T G A C T G A G T C G A T C G T C A G T C A C T G A A C T G G T A C A C G T C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

YY1/MA0095.2/Jaspar

Match Rank:4
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AAAWGGCCNAAGMTTT
CAAGATGGCGGC------
 A C G T A C G T C G T A C T G A C T G A C G T A A C T G A C T G A G T C G A T C G T C A G T C A C T G A A C T G G T A C A C G T C G A T A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.51
Offset:3
Orientation:forward strand
Alignment:AAAWGGCCNAAGMTTT
---AGGCCTAG-----
 C G T A C T G A C T G A C G T A A C T G A C T G A G T C G A T C G T C A G T C A C T G A A C T G G T A C A C G T C G A T A C G T
A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.50
Offset:3
Orientation:forward strand
Alignment:AAAWGGCCNAAGMTTT
---AGGCCTNG-----
 C G T A C T G A C T G A C G T A A C T G A C T G A G T C G A T C G T C A G T C A C T G A A C T G G T A C A C G T C G A T A C G T
A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:AAAWGGCCNAAGMTTT
--CAGGCCNNGGCCNN
 C G T A C T G A C T G A C G T A A C T G A C T G A G T C G A T C G T C A G T C A C T G A A C T G G T A C A C G T C G A T A C G T
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PH0171.1_Nkx2-1/Jaspar

Match Rank:8
Score:0.49
Offset:-6
Orientation:reverse strand
Alignment:------AAAWGGCCNAAGMTTT
AANTTCAAGTGGCTTN------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A C T G A C G T A A C T G A C T G A G T C G A T C G T C A G T C A C T G A A C T G G T A C A C G T C G A T A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:9
Score:0.49
Offset:-6
Orientation:reverse strand
Alignment:------AAAWGGCCNAAGMTTT
NTNNTTAAGTGGNTNAN-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A C T G A C G T A A C T G A C T G A G T C G A T C G T C A G T C A C T G A A C T G G T A C A C G T C G A T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G A C G T A C G T A C G T A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:10
Score:0.48
Offset:-6
Orientation:reverse strand
Alignment:------AAAWGGCCNAAGMTTT
AAATTCAAGTGGNTTN------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A C T G A C G T A A C T G A C T G A G T C G A T C G T C A G T C A C T G A A C T G G T A C A C G T C G A T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T