Information for 5-TCACCAHCAAGTTCAA (Motif 5)

C G A T G T A C G T C A G T A C A G T C C G T A G C A T A G T C G T C A C G T A A C T G C G A T A C G T G A T C C G T A G T C A
Reverse Opposite:
A C G T C G A T C T A G C G T A G C T A A G T C A C G T A C G T A C T G C G T A A C G T C T A G A C T G A C G T A C T G C G T A
p-value:1e-12
log p-value:-2.850e+01
Information Content per bp:1.748
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.0 +/- 14.8bp
Average Position of motif in Background49.5 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESRRB/MA0141.3/Jaspar

Match Rank:1
Score:0.61
Offset:6
Orientation:forward strand
Alignment:TCACCAHCAAGTTCAA-
------TCAAGGTCATA
 C G A T G T A C G T C A G T A C A G T C C G T A G C A T A G T C G T C A C G T A A C T G C G A T A C G T G A T C C G T A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

RORA/MA0071.1/Jaspar

Match Rank:2
Score:0.60
Offset:5
Orientation:forward strand
Alignment:TCACCAHCAAGTTCAA
-----ATCAAGGTCA-
 C G A T G T A C G T C A G T A C A G T C C G T A G C A T A G T C G T C A C G T A A C T G C G A T A C G T G A T C C G T A G T C A
A C G T A C G T A C G T A C G T A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:TCACCAHCAAGTTCAA
------TCAAGGTCAN
 C G A T G T A C G T C A G T A C A G T C C G T A G C A T A G T C G T C A C G T A A C T G C G A T A C G T G A T C C G T A G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

Esrrg/MA0643.1/Jaspar

Match Rank:4
Score:0.59
Offset:6
Orientation:forward strand
Alignment:TCACCAHCAAGTTCAA
------TCAAGGTCAT
 C G A T G T A C G T C A G T A C A G T C C G T A G C A T A G T C G T C A C G T A A C T G C G A T A C G T G A T C C G T A G T C A
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

PB0014.1_Esrra_1/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TCACCAHCAAGTTCAA----
---TATTCAAGGTCATGCGA
 C G A T G T A C G T C A G T A C A G T C C G T A G C A T A G T C G T C A C G T A A C T G C G A T A C G T G A T C C G T A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TCACCAHCAAGTTCAA
-----BTCAAGGTCA-
 C G A T G T A C G T C A G T A C A G T C C G T A G C A T A G T C G T C A C G T A A C T G C G A T A C G T G A T C C G T A G T C A
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.57
Offset:7
Orientation:forward strand
Alignment:TCACCAHCAAGTTCAA-
-------CAAGGHCANV
 C G A T G T A C G T C A G T A C A G T C C G T A G C A T A G T C G T C A C G T A A C T G C G A T A C G T G A T C C G T A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

PH0040.1_Hmbox1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TCACCAHCAAGTTCAA
GANGTTAACTAGTTTNN
 A C G T C G A T G T A C G T C A G T A C A G T C C G T A G C A T A G T C G T C A C G T A A C T G C G A T A C G T G A T C C G T A G T C A
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

TFCP2/MA0145.3/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TCACCAHCAAGTTCAA
----AAACCGGTTT--
 C G A T G T A C G T C A G T A C A G T C C G T A G C A T A G T C G T C A C G T A A C T G C G A T A C G T G A T C C G T A G T C A
A C G T A C G T A C G T A C G T T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:10
Score:0.55
Offset:8
Orientation:forward strand
Alignment:TCACCAHCAAGTTCAA
--------AAGGTCAC
 C G A T G T A C G T C A G T A C A G T C C G T A G C A T A G T C G T C A C G T A A C T G C G A T A C G T G A T C C G T A G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C