Information for 13-GTCRACTTAC (Motif 35)

A C T G A C G T A T G C C T A G G T C A G T A C A C G T A C G T C G T A A G T C
Reverse Opposite:
C T A G A C G T C G T A C G T A A C T G A C G T G A T C A T C G C G T A A G T C
p-value:1e-5
log p-value:-1.251e+01
Information Content per bp:1.837
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif47.4
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets63.7 +/- 19.1bp
Average Position of motif in Background53.1 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GTCRACTTAC
GKVTCADRTTWC
 A C G T A C G T A C T G A C G T A T G C C T A G G T C A G T A C A C G T A C G T C G T A A G T C
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GTCRACTTAC
GKMTCADRTTWC
 A C G T A C G T A C T G A C G T A T G C C T A G G T C A G T A C A C G T A C G T C G T A A G T C
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C

ALX3/MA0634.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GTCRACTTAC-
-TCTAATTAAA
 A C T G A C G T A T G C C T A G G T C A G T A C A C G T A C G T C G T A A G T C A C G T
A C G T G A C T A G T C G A C T C T G A G T C A G C A T G A C T G C T A T C G A T G C A

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GTCRACTTAC---
--NNACTTACCTN
 A C T G A C G T A T G C C T A G G T C A G T A C A C G T A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

LBX1/MA0618.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GTCRACTTAC
--CTAATTAA
 A C T G A C G T A T G C C T A G G T C A G T A C A C G T A C G T C G T A A G T C
A C G T A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A

DLX6/MA0882.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GTCRACTTAC
--CCAATTAC
 A C T G A C G T A T G C C T A G G T C A G T A C A C G T A C G T C G T A A G T C
A C G T A C G T T A G C G A T C G T C A G T C A C G A T A G C T G C T A G T A C

Dlx4/MA0881.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GTCRACTTAC
--CCAATTAC
 A C T G A C G T A T G C C T A G G T C A G T A C A C G T A C G T C G T A A G T C
A C G T A C G T T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C

Dlx3/MA0880.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GTCRACTTAC
--CCAATTAC
 A C T G A C G T A T G C C T A G G T C A G T A C A C G T A C G T C G T A A G T C
A C G T A C G T T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C

Prrx2/MA0075.2/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GTCRACTTAC
--CCAATTAA
 A C T G A C G T A T G C C T A G G T C A G T A C A C G T A C G T C G T A A G T C
A C G T A C G T A G T C G A T C T C G A T G C A G A C T G A C T G C T A T C G A

BSX/MA0876.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GTCRACTTAC
--CCAATTAA
 A C T G A C G T A T G C C T A G G T C A G T A C A C G T A C G T C G T A A G T C
A C G T A C G T T A G C G A T C T G C A T C G A A C G T C G A T C G T A T C G A