Information for 8-GAGTAAGGTC (Motif 31)

A C T G C G T A A C T G C A G T C G T A C G T A A C T G T C A G C G A T A T G C
Reverse Opposite:
A T C G C G T A A G T C A G T C A C G T A C G T G T C A G T A C A C G T A G T C
p-value:1e-7
log p-value:-1.773e+01
Information Content per bp:1.866
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif64.9
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets47.9 +/- 28.8bp
Average Position of motif in Background47.3 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GAGTAAGGTC---
GGAGAAAGGTGCGA
 A C G T A C T G C G T A A C T G C A G T C G T A C G T A A C T G T C A G C G A T A T G C A C G T A C G T A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

Esrrg/MA0643.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GAGTAAGGTC--
--TCAAGGTCAT
 A C T G C G T A A C T G C A G T C G T A C G T A A C T G T C A G C G A T A T G C A C G T A C G T
A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GAGTAAGGTC--
----AAGGTCAC
 A C T G C G T A A C T G C A G T C G T A C G T A A C T G T C A G C G A T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GAGTAAGGTC--
--TCAAGGTCAN
 A C T G C G T A A C T G C A G T C G T A C G T A A C T G T C A G C G A T A T G C A C G T A C G T
A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GAGTAAGGTC-
-ATCAAGGTCA
 A C T G C G T A A C T G C A G T C G T A C G T A A C T G T C A G C G A T A T G C A C G T
A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GAGTAAGGTC-
---TRAGGTCA
 A C T G C G T A A C T G C A G T C G T A C G T A A C T G T C A G C G A T A T G C A C G T
A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GAGTAAGGTC---
---CAAGGHCANV
 A C T G C G T A A C T G C A G T C G T A C G T A A C T G T C A G C G A T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

ESRRB/MA0141.3/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GAGTAAGGTC---
--TCAAGGTCATA
 A C T G C G T A A C T G C A G T C G T A C G T A A C T G T C A G C G A T A T G C A C G T A C G T A C G T
A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GAGTAAGGTC-
ANGNAAAGGTCA
 A C G T A C T G C G T A A C T G C A G T C G T A C G T A A C T G T C A G C G A T A T G C A C G T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAGTAAGGTC------
TATTCAAGGTCATGCGA
 A C G T A C T G C G T A A C T G C A G T C G T A C G T A A C T G T C A G C G A T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A