Information for 6-ACAAGGCCCA (Motif 27)

G T C A G A T C C G T A C G T A A C T G A C T G A T G C A G T C T A G C C T G A
Reverse Opposite:
A G C T A T C G A C T G A T C G G T A C A G T C C G A T A C G T C T A G A C G T
p-value:1e-8
log p-value:-1.858e+01
Information Content per bp:1.843
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.71%
Number of Background Sequences with motif76.3
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets61.0 +/- 23.4bp
Average Position of motif in Background50.8 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:ACAAGGCCCA-
-CAAGGHCANV
 G T C A G A T C C G T A C G T A A C T G A C T G A T G C A G T C T A G C C T G A A C G T
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:ACAAGGCCCA
-CTAGGCCT-
 G T C A G A T C C G T A C G T A A C T G A C T G A T G C A G T C T A G C C T G A
A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ACAAGGCCCA
NTCAAGGTCA-
 A C G T G T C A G A T C C G T A C G T A A C T G A C T G A T G C A G T C T A G C C T G A
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.67
Offset:3
Orientation:forward strand
Alignment:ACAAGGCCCA-
---AGGCCTNG
 G T C A G A T C C G T A C G T A A C T G A C T G A T G C A G T C T A G C C T G A A C G T
A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ACAAGGCCCA
BTCAAGGTCA-
 A C G T G T C A G A T C C G T A C G T A A C T G A C T G A T G C A G T C T A G C C T G A
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ACAAGGCCCA------
--CAGGCCNNGGCCNN
 G T C A G A T C C G T A C G T A A C T G A C T G A T G C A G T C T A G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ACAAGGCCCA
ACAAAG----
 G T C A G A T C C G T A C G T A A C T G A C T G A T G C A G T C T A G C C T G A
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ACAAGGCCCA-
AAGTTCAAGGTCAGC
 A C G T A C G T A C G T A C G T G T C A G A T C C G T A C G T A A C T G A C T G A T G C A G T C T A G C C T G A A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

PB0200.1_Zfp187_2/Jaspar

Match Rank:9
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------ACAAGGCCCA
NNAGGGACAAGGGCNC
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A G A T C C G T A C G T A A C T G A C T G A T G C A G T C T A G C C T G A
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ACAAGGCCCA
VRRACAAWGG---
 A C G T A C G T A C G T G T C A G A T C C G T A C G T A A C T G A C T G A T G C A G T C T A G C C T G A
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T