Information for 3-GGTCTAGCCA (Motif 25)

C A T G A T C G G A C T T A G C C G A T C T G A T A C G A T G C G A T C G C T A
Reverse Opposite:
C G A T C T A G T A C G A T G C G A C T C G T A A T C G C T G A T A G C G T A C
p-value:1e-8
log p-value:-2.047e+01
Information Content per bp:1.683
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif4.82%
Number of Background Sequences with motif648.4
Percentage of Background Sequences with motif1.32%
Average Position of motif in Targets57.6 +/- 26.2bp
Average Position of motif in Background50.6 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GGTCTAGCCA
CGTCTAGACA
 C A T G A T C G G A C T T A G C C G A T C T G A T A C G A T G C G A T C G C T A
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GGTCTAGCCA-
BCNGGTTCTAGANCN
 A C G T A C G T A C G T A C G T C A T G A T C G G A C T T A G C C G A T C T G A T A C G A T G C G A T C G C T A A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGTCTAGCCA
AGGCCTAG---
 A C G T C A T G A T C G G A C T T A G C C G A T C T G A T A C G A T G C G A T C G C T A
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGTCTAGCCA----
--ACTAGCCAATCA
 C A T G A T C G G A C T T A G C C G A T C T G A T A C G A T G C G A T C G C T A A C G T A C G T A C G T A C G T
A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

PB0090.1_Zbtb12_1/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GGTCTAGCCA--
CTAAGGTTCTAGATCAC
 A C G T A C G T A C G T A C G T A C G T C A T G A T C G G A C T T A G C C G A T C T G A T A C G A T G C G A T C G C T A A C G T A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GGTCTAGCCA-
---BCAGACWA
 C A T G A T C G G A C T T A G C C G A T C T G A T A C G A T G C G A T C G C T A A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGTCTAGCCA
CTGTCTGG---
 A C G T C A T G A T C G G A C T T A G C C G A T C T G A T A C G A T G C G A T C G C T A
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GGTCTAGCCA--
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C G T C A T G A T C G G A C T T A G C C G A T C T G A T A C G A T G C G A T C G C T A A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GGTCTAGCCA--
---CGTGCCAAG
 C A T G A T C G G A C T T A G C C G A T C T G A T A C G A T G C G A T C G C T A A C G T A C G T
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GGTCTAGCCA-
-----TGCCAA
 C A T G A T C G G A C T T A G C C G A T C T G A T A C G A T G C G A T C G C T A A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A