p-value: | 1e-9 |
log p-value: | -2.104e+01 |
Information Content per bp: | 1.844 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.78% |
Number of Background Sequences with motif | 3.8 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 49.4 +/- 25.8bp |
Average Position of motif in Background | 58.7 +/- 22.8bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Rarg/MA0859.1/Jaspar
Match Rank: | 1 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TGWGAGMTTKTSAGMY- -TTGACCTTTTGACCTT |
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Rarb/MA0857.1/Jaspar
Match Rank: | 2 |
Score: | 0.55 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TGWGAGMTTKTSAGMY-- --TGACCTTTTGACCTTT |
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Nkx2-5(var.2)/MA0503.1/Jaspar
Match Rank: | 3 |
Score: | 0.54 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TGWGAGMTTKTSAGMY CTTGAGTGGCT------- |
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GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer
Match Rank: | 4 |
Score: | 0.54 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TGWGAGMTTKTSAGMY--- ----AGATGKDGAGATAAG |
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Nr2f6(var.2)/MA0728.1/Jaspar
Match Rank: | 5 |
Score: | 0.53 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TGWGAGMTTKTSAGMY- --TGACCTTTTGACCTC |
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Gfi1/MA0038.1/Jaspar
Match Rank: | 6 |
Score: | 0.53 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TGWGAGMTTKTSAGMY -CNGTGATTTN----- |
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PH0170.1_Tgif2/Jaspar
Match Rank: | 7 |
Score: | 0.53 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TGWGAGMTTKTSAGMY GTATTGACAGCTNNTT---- |
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PH0102.1_Meis1/Jaspar
Match Rank: | 8 |
Score: | 0.51 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TGWGAGMTTKTSAGMY NTATTGACAGCTNNTT---- |
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PH0105.1_Meis3/Jaspar
Match Rank: | 9 |
Score: | 0.50 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TGWGAGMTTKTSAGMY GTATTGACAGGTNNTT---- |
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PH0104.1_Meis2/Jaspar
Match Rank: | 10 |
Score: | 0.50 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TGWGAGMTTKTSAGMY NTATTGACAGGTNNTN---- |
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