Information for 7-WCARTCAAYMACA (Motif 22)

C G A T A G T C C G T A C T G A A C G T G T A C C G T A C G T A A G T C G T A C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G C T A G A C G T A C G T A C T G C G T A A G C T A C G T A C T G C G T A
p-value:1e-9
log p-value:-2.104e+01
Information Content per bp:1.878
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.4 +/- 12.2bp
Average Position of motif in Background50.6 +/- 18.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:WCARTCAAYMACA
CCAATCAA-----
 C G A T A G T C C G T A C T G A A C G T G T A C C G T A C G T A A G T C G T A C C G T A A G T C C G T A
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:WCARTCAAYMACA---
-CAAACAACAACACCT
 C G A T A G T C C G T A C T G A A C G T G T A C C G T A C G T A A G T C G T A C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PBX1/MA0070.1/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---WCARTCAAYMACA
CCATCAATCAAA----
 A C G T A C G T A C G T C G A T A G T C C G T A C T G A A C G T G T A C C G T A C G T A A G T C G T A C C G T A A G T C C G T A
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T A C G T A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----WCARTCAAYMACA
CGACCCAATCAACGGTG
 A C G T A C G T A C G T A C G T C G A T A G T C C G T A C T G A A C G T G T A C C G T A C G T A A G T C G T A C C G T A A G T C C G T A
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.64
Offset:5
Orientation:forward strand
Alignment:WCARTCAAYMACA--
-----AAACCACANN
 C G A T A G T C C G T A C T G A A C G T G T A C C G T A C G T A A G T C G T A C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

PB0093.1_Zfp105_1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-WCARTCAAYMACA-
AACAAACAACAAGAG
 A C G T C G A T A G T C C G T A C T G A A C G T G T A C C G T A C G T A A G T C G T A C C G T A A G T C C G T A A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:WCARTCAAYMACA--
-----AAACCACAGC
 C G A T A G T C C G T A C T G A A C G T G T A C C G T A C G T A A G T C G T A C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.62
Offset:4
Orientation:forward strand
Alignment:WCARTCAAYMACA---
----NWAACCACADNN
 C G A T A G T C C G T A C T G A A C G T G T A C C G T A C G T A A G T C G T A C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-WCARTCAAYMACA
HNRAATCAAT----
 A C G T C G A T A G T C C G T A C T G A A C G T G T A C C G T A C G T A A G T C G T A C C G T A A G T C C G T A
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----WCARTCAAYMACA
GAAGATCAATCACTTA--
 A C G T A C G T A C G T A C G T A C G T C G A T A G T C C G T A C T G A A C G T G T A C C G T A C G T A A G T C G T A C C G T A A G T C C G T A
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A A C G T A C G T