Information for 3-VCCTCATAGCCTC (Motif 16)

T C G A G T A C A G T C A C G T A G T C C G T A C G A T C T G A A C T G G T A C A T G C A C G T A G T C
Reverse Opposite:
T C A G C G T A A T C G A C T G A G T C A G C T C G T A A C G T A C T G C G T A A C T G A C T G A C G T
p-value:1e-10
log p-value:-2.447e+01
Information Content per bp:1.844
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif8.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.1 +/- 21.7bp
Average Position of motif in Background44.5 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:VCCTCATAGCCTC
ACATCAAAGG---
 T C G A G T A C A G T C A C G T A G T C C G T A C G A T C T G A A C T G G T A C A T G C A C G T A G T C
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:VCCTCATAGCCTC
ACWTCAAAGG---
 T C G A G T A C A G T C A C G T A G T C C G T A C G A T C T G A A C T G G T A C A T G C A C G T A G T C
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--VCCTCATAGCCTC
AAAGATCAAAGGAA-
 A C G T A C G T T C G A G T A C A G T C A C G T A G T C C G T A C G A T C T G A A C T G G T A C A T G C A C G T A G T C
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:VCCTCATAGCCTC
ACATCAAAGGNA-
 T C G A G T A C A G T C A C G T A G T C C G T A C G A T C T G A A C T G G T A C A T G C A C G T A G T C
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:VCCTCATAGCCTC
--AAGATATCCTT
 T C G A G T A C A G T C A C G T A G T C C G T A C G A T C T G A A C T G G T A C A T G C A C G T A G T C
A C G T A C G T G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T

Spz1/MA0111.1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:VCCTCATAGCCTC
-GCTGTTACCCT-
 T C G A G T A C A G T C A C G T A G T C C G T A C G A T C T G A A C T G G T A C A T G C A C G T A G T C
A C G T A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:7
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---VCCTCATAGCCTC-
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T T C G A G T A C A G T C A C G T A G T C C G T A C G A T C T G A A C T G G T A C A T G C A C G T A G T C A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---VCCTCATAGCCTC-
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T T C G A G T A C A G T C A C G T A G T C C G T A C G A T C T G A A C T G G T A C A T G C A C G T A G T C A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0040.1_Lef1_1/Jaspar

Match Rank:9
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---VCCTCATAGCCTC-
NANAGATCAAAGGGNNN
 A C G T A C G T A C G T T C G A G T A C A G T C A C G T A G T C C G T A C G A T C T G A A C T G G T A C A T G C A C G T A G T C A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.50
Offset:2
Orientation:forward strand
Alignment:VCCTCATAGCCTC
--NTCAAGGTCA-
 T C G A G T A C A G T C A C G T A G T C C G T A C G A T C T G A A C T G G T A C A T G C A C G T A G T C
A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T