Information for 11-AGMAGAGAWGGCCATG (Motif 13)

C G T A C T A G G T C A C G T A C T A G C G T A A C T G C G T A C G A T A C T G A C T G G T A C G T A C C G T A A C G T A C T G
Reverse Opposite:
G T A C C G T A C G A T A C T G A C T G A G T C G T A C G C T A C G A T T A G C A C G T A G T C A C G T C A G T A G T C A C G T
p-value:1e-11
log p-value:-2.539e+01
Information Content per bp:1.760
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif7.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets58.0 +/- 23.6bp
Average Position of motif in Background48.6 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)-2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.51
Offset:6
Orientation:forward strand
Alignment:AGMAGAGAWGGCCATG
------CAAGGHCANV
 C G T A C T A G G T C A C G T A C T A G C G T A A C T G C G T A C G A T A C T G A C T G G T A C G T A C C G T A A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

KLF13/MA0657.1/Jaspar

Match Rank:2
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:AGMAGAGAWGGCCATG----
--CAAAAAGGGGCGTGGCAT
 C G T A C T A G G T C A C G T A C T A G C G T A A C T G C G T A C G A T A C T G A C T G G T A C G T A C C G T A A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T G T A C G T C A G T C A G T C A C T G A C T G A C A T G C T A G A C T G C T A G G A T C T A C G A G C T C A T G C A T G G A T C G T C A G A C T

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----AGMAGAGAWGGCCATG
AGTAAACAAAAAAGAACANN
 A C G T A C G T A C G T A C G T C G T A C T A G G T C A C G T A C T A G C G T A A C T G C G T A C G A T A C T G A C T G G T A C G T A C C G T A A C G T A C T G
C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A

Gata1/MA0035.3/Jaspar

Match Rank:4
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:AGMAGAGAWGGCCATG
-ANAGATAAGAA----
 C G T A C T A G G T C A C G T A C T A G C G T A A C T G C G T A C G A T A C T G A C T G G T A C G T A C C G T A A C G T A C T G
A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T A C G T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:5
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---AGMAGAGAWGGCCATG
CAAAGTAAACANNNN----
 A C G T A C G T A C G T C G T A C T A G G T C A C G T A C T A G C G T A A C T G C G T A C G A T A C T G A C T G G T A C G T A C C G T A A C G T A C T G
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A A C G T A C G T A C G T A C G T

Gata4/MA0482.1/Jaspar

Match Rank:6
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:AGMAGAGAWGGCCATG
NNGAGATAAGA-----
 C G T A C T A G G T C A C G T A C T A G C G T A A C T G C G T A C G A T A C T G A C T G G T A C G T A C C G T A A C G T A C T G
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:7
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--AGMAGAGAWGGCCATG
WAAGTAAAYA--------
 A C G T A C G T C G T A C T A G G T C A C G T A C T A G C G T A A C T G C G T A C G A T A C T G A C T G G T A C G T A C C G T A A C G T A C T G
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SRF/MA0083.3/Jaspar

Match Rank:8
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--AGMAGAGAWGGCCATG
TGACCATATATGGTCA--
 A C G T A C G T C G T A C T A G G T C A C G T A C T A G C G T A A C T G C G T A C G A T A C T G A C T G G T A C G T A C C G T A A C G T A C T G
G C A T A C T G G T C A A T G C A G T C C G T A C G A T C T G A A C G T C G T A G C A T T A C G C T A G C A G T T G A C C G T A A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.48
Offset:7
Orientation:reverse strand
Alignment:AGMAGAGAWGGCCATG--
-------AAGGATATNTN
 C G T A C T A G G T C A C G T A C T A G C G T A A C T G C G T A C G A T A C T G A C T G G T A C G T A C C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--AGMAGAGAWGGCCATG
AAAGTAAACA--------
 A C G T A C G T C G T A C T A G G T C A C G T A C T A G C G T A A C T G C G T A C G A T A C T G A C T G G T A C G T A C C G T A A C G T A C T G
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T