Information for 6-GCTTCACGGACTB (Motif 13)

A T C G A T G C A G C T A G C T A T G C T G C A T A G C T A C G T A C G T G C A A T G C A G C T A G T C
Reverse Opposite:
T C A G T C G A T A C G A C G T A T G C A T G C A T C G A C G T T A C G T C G A T C G A T A C G T A G C
p-value:1e-9
log p-value:-2.209e+01
Information Content per bp:1.424
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.8 +/- 26.9bp
Average Position of motif in Background59.2 +/- 5.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCTTCACGGACTB
GCTTCC-------
 A T C G A T G C A G C T A G C T A T G C T G C A T A G C T A C G T A C G T G C A A T G C A G C T A G T C
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GCTTCACGGACTB
---GCTCGGSCTC
 A T C G A T G C A G C T A G C T A T G C T G C A T A G C T A C G T A C G T G C A A T G C A G C T A G T C
A C G T A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCTTCACGGACTB
GGGGCCGAGGCCTG
 A C G T A T C G A T G C A G C T A G C T A T G C T G C A T A G C T A C G T A C G T G C A A T G C A G C T A G T C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCTTCACGGACTB
--NTCAAGGTCA-
 A T C G A T G C A G C T A G C T A T G C T G C A T A G C T A C G T A C G T G C A A T G C A G C T A G T C
A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCTTCACGGACTB
AGTATTCTCGGTTGC
 A C G T A C G T A T C G A T G C A G C T A G C T A T G C T G C A T A G C T A C G T A C G T G C A A T G C A G C T A G T C
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCTTCACGGACTB
-CTTCCNGGAA--
 A T C G A T G C A G C T A G C T A T G C T G C A T A G C T A C G T A C G T G C A A T G C A G C T A G T C
A C G T A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GCTTCACGGACTB--
---NCGCGGACGTTG
 A T C G A T G C A G C T A G C T A T G C T G C A T A G C T A C G T A C G T G C A A T G C A G C T A G T C A C G T A C G T
A C G T A C G T A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

E2F4/MA0470.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCTTCACGGACTB
NNTTCCCGCCC--
 A T C G A T G C A G C T A G C T A T G C T G C A T A G C T A C G T A C G T G C A A T G C A G C T A G T C
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GCTTCACGGACTB
---GCACGTNC--
 A T C G A T G C A G C T A G C T A T G C T G C A T A G C T A C G T A C G T G C A A T G C A G C T A G T C
A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GCTTCACGGACTB
NTCCCCTCAGGGANT-
 A C G T A C G T A C G T A T C G A T G C A G C T A G C T A T G C T G C A T A G C T A C G T A C G T G C A A T G C A G C T A G T C
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T A C G T