Information for 12-CCGCCTGCAA (Motif 20)

A G T C A G T C A C T G A G T C A G T C A C G T A C T G A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A G T C C G T A A C T G A C T G A G T C A C T G A C T G
p-value:1e-5
log p-value:-1.328e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif10.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets35.8 +/- 11.0bp
Average Position of motif in Background53.1 +/- 41.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CCGCCTGCAA
SNGCACCTGCHS
 A C G T A C G T A G T C A G T C A C T G A G T C A G T C A C G T A C T G A G T C C G T A C G T A
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCGCCTGCAA
NNCACCTGNN-
 A C G T A G T C A G T C A C T G A G T C A G T C A C G T A C T G A G T C C G T A C G T A
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCGCCTGCAA---
GGGCCGTGTGCAAAAA
 A C G T A C G T A C G T A G T C A G T C A C T G A G T C A G T C A C G T A C T G A G T C C G T A C G T A A C G T A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

MTF1/MA0863.1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCGCCTGCAA-
GTGCCGTGTGCAAA
 A C G T A C G T A C G T A G T C A G T C A C T G A G T C A G T C A C G T A C T G A G T C C G T A C G T A A C G T
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

TCF3/MA0522.2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCGCCTGCAA
AACACCTGCT-
 A C G T A G T C A G T C A C T G A G T C A G T C A C G T A C T G A G T C C G T A C G T A
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CCGCCTGCAA-
ANTGCCTGAGGCAAN
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G A G T C A G T C A C G T A C T G A G T C C G T A C G T A A C G T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCGCCTGCAA
CGCACCTGCT-
 A C G T A G T C A G T C A C T G A G T C A G T C A C G T A C T G A G T C C G T A C G T A
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCGCCTGCAA
NCACCTGTN-
 A G T C A G T C A C T G A G T C A G T C A C G T A C T G A G T C C G T A C G T A
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCGCCTGCAA----
--AGATGCAATCCC
 A G T C A G T C A C T G A G T C A G T C A C G T A C T G A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCGCCTGCAA
TTCCCGCCWG---
 A C G T A C G T A C G T A G T C A G T C A C T G A G T C A G T C A C G T A C T G A G T C C G T A C G T A
A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T A C G T A C G T