Information for 8-AGCTTGTGGG (Motif 13)

C T G A T A C G A G T C C G A T A G C T A T C G C G A T C T A G C T A G C A T G
Reverse Opposite:
G T A C G A T C G A T C G C T A T A G C T C G A G C T A T C A G A T G C G A C T
p-value:1e-8
log p-value:-2.034e+01
Information Content per bp:1.535
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.52%
Number of Background Sequences with motif253.0
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets51.5 +/- 22.6bp
Average Position of motif in Background51.5 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AGCTTGTGGG
AAGCTTG----
 A C G T C T G A T A C G A G T C C G A T A G C T A T C G C G A T C T A G C T A G C A T G
C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AGCTTGTGGG---
-NNHTGTGGTTWN
 C T G A T A C G A G T C C G A T A G C T A T C G C G A T C T A G C T A G C A T G A C G T A C G T A C G T
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AGCTTGTGGG--
-GTCTGTGGTTT
 C T G A T A C G A G T C C G A T A G C T A T C G C G A T C T A G C T A G C A T G A C G T A C G T
A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX2/MA0511.2/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AGCTTGTGGG--
---TTGCGGTTT
 C T G A T A C G A G T C C G A T A G C T A T C G C G A T C T A G C T A G C A T G A C G T A C G T
A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

RUNX3/MA0684.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGCTTGTGGG--
--TTTGCGGTTT
 C T G A T A C G A G T C C G A T A G C T A T C G C G A T C T A G C T A G C A T G A C G T A C G T
A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

TFAP2A/MA0003.3/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGCTTGTGGG-
NGCCTGAGGCN
 C T G A T A C G A G T C C G A T A G C T A T C G C G A T C T A G C T A G C A T G A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGCTTGTGGG--
--NNTGTGGTTT
 C T G A T A C G A G T C C G A T A G C T A T C G C G A T C T A G C T A G C A T G A C G T A C G T
A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGCTTGTGGG
ACAGGATGTGGT
 A C G T A C G T C T G A T A C G A G T C C G A T A G C T A T C G C G A T C T A G C T A G C A T G
T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AGCTTGTGGG---
---CTGTGGTTTN
 C T G A T A C G A G T C C G A T A G C T A T C G C G A T C T A G C T A G C A T G A C G T A C G T A C G T
A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGCTTGTGGG--
--GCTGTGGTTT
 C T G A T A C G A G T C C G A T A G C T A T C G C G A T C T A G C T A G C A T G A C G T A C G T
A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T