Information for 5-TCGAGTTGAT (Motif 10)

A G C T A T G C A C T G T C G A C A T G A C G T A C G T A T C G G C T A A C G T
Reverse Opposite:
G T C A C G A T A T G C C G T A T G C A G T A C A G C T A G T C T A C G C T G A
p-value:1e-9
log p-value:-2.175e+01
Information Content per bp:1.738
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.74%
Number of Background Sequences with motif278.4
Percentage of Background Sequences with motif0.58%
Average Position of motif in Targets57.0 +/- 29.1bp
Average Position of motif in Background48.6 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TCGAGTTGAT---
-----TTGATTGN
 A G C T A T G C A C T G T C G A C A T G A C G T A C G T A T C G G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

SREBF2/MA0596.1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TCGAGTTGAT
ATGGGGTGAT
 A G C T A T G C A C T G T C G A C A T G A C G T A C G T A T C G G C T A A C G T
T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T

PB0105.1_Arid3a_2/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TCGAGTTGAT------
-NNATNTGATANNNNN
 A G C T A T G C A C T G T C G A C A T G A C G T A C G T A T C G G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C T G A G C T A A G C T G C A T G A C T A T C G T C G A A G C T T C G A A G T C A T C G A C T G C A T G C A G T

PH0037.1_Hdx/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TCGAGTTGAT--------
-TNNNATGATTTCNNCNN
 A G C T A T G C A C T G T C G A C A T G A C G T A C G T A T C G G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

POL002.1_INR/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TCGAGTTGAT
-NNNANTGA-
 A G C T A T G C A C T G T C G A C A T G A C G T A C G T A T C G G C T A A C G T
A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TCGAGTTGAT
GTGGGGTGAT
 A G C T A T G C A C T G T C G A C A T G A C G T A C G T A T C G G C T A A C G T
T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TCGAGTTGAT----
----ATTGATTYND
 A G C T A T G C A C T G T C G A C A T G A C G T A C G T A T C G G C T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

PH0026.1_Duxbl/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TCGAGTTGAT-------
NNNNGTTGATTGGGTCG
 A G C T A T G C A C T G T C G A C A T G A C G T A C G T A T C G G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

Arid3a/MA0151.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TCGAGTTGAT
----TTTAAT
 A G C T A T G C A C T G T C G A C A T G A C G T A C G T A T C G G C T A A C G T
A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T

PH0016.1_Cux1_1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TCGAGTTGAT-------
ACCGGTTGATCACCTGA
 A G C T A T G C A C T G T C G A C A T G A C G T A C G T A T C G G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A A T G C G A T C T C A G T C A G G A C T G C A T C T A G C T G A C G A T G A T C G C T A G T A C T A G C C G A T A T C G C T G A