Information for 6-CAGGCTCTGGCCA (Motif 4)

A G T C G T C A A C T G A C T G A G T C A C G T A G T C A C G T C T A G A C T G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G T C A G T C C G T A C T A G G T C A A C T G G T A C A G T C A C G T A C T G
p-value:1e-13
log p-value:-3.077e+01
Information Content per bp:1.903
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets79.0 +/- 12.1bp
Average Position of motif in Background45.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CAGGCTCTGGCCA-
CAGGCCNNGGCCNN
 A G T C G T C A A C T G A C T G A G T C A C G T A G T C A C G T C T A G A C T G A G T C A G T C C G T A A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCTCTGGCCA------
YCAGGCWCAGTACCAGGCTC
 A C G T A G T C G T C A A C T G A C T G A G T C A C G T A G T C A C G T C T A G A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CAGGCTCTGGCCA
NTGGGTGTGGCC-
 A G T C G T C A A C T G A C T G A G T C A C G T A G T C A C G T C T A G A C T G A G T C A G T C C G T A
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:CAGGCTCTGGCCA-
--------TGCCAA
 A G T C G T C A A C T G A C T G A G T C A C G T A G T C A C G T C T A G A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CAGGCTCTGGCCA--
------CGTGCCAAG
 A G T C G T C A A C T G A C T G A G T C A C G T A G T C A C G T C T A G A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CAGGCTCTGGCCA
ACAGGATGTGGT--
 A C G T A G T C G T C A A C T G A C T G A G T C A C G T A G T C A C G T C T A G A C T G A G T C A G T C C G T A
T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T A C G T A C G T

HES7/MA0822.1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAGGCTCTGGCCA
-TGGCACGTGCCA
 A G T C G T C A A C T G A C T G A G T C A C G T A G T C A C G T C T A G A C T G A G T C A G T C C G T A
A C G T G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CAGGCTCTGGCCA----
-----ACTAGCCAATCA
 A G T C G T C A A C T G A C T G A G T C A C G T A G T C A C G T C T A G A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CAGGCTCTGGCCA-
--GCCTCAGGGCAT
 A G T C G T C A A C T G A C T G A G T C A C G T A G T C A C G T C T A G A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAGGCTCTGGCCA-
TCACCTCTGGGCAG
 A G T C G T C A A C T G A C T G A G T C A C G T A G T C A C G T C T A G A C T G A G T C A G T C C G T A A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G