Information for 7-TAGATGATTA (Motif 16)

A G C T C G T A A C T G C G T A A C G T A C T G C G T A A C G T A C G T C G T A
Reverse Opposite:
C G A T C G T A C G T A A C G T A G T C C G T A A C G T A G T C A C G T T C G A
p-value:1e-6
log p-value:-1.485e+01
Information Content per bp:1.928
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif24.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets32.9 +/- 22.1bp
Average Position of motif in Background46.7 +/- 19.2bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TAGATGATTA-
AAGAGGATTAG
 A G C T C G T A A C T G C G T A A C G T A C T G C G T A A C G T A C G T C G T A A C G T
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

EVX1/MA0887.1/Jaspar

Match Rank:2
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TAGATGATTA--
--GGTAATTAGC
 A G C T C G T A A C T G C G T A A C G T A C T G C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T T C A G T A C G G A C T T C G A T C G A A C G T G A C T C T G A A T C G T A G C

EVX2/MA0888.1/Jaspar

Match Rank:3
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TAGATGATTA--
--GGTAATTAGC
 A G C T C G T A A C T G C G T A A C G T A C T G C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T T A C G T A C G G A C T T G C A T C G A A C G T A G C T C T G A T A C G A T G C

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TAGATGATTA
TAATTGATTA
 A G C T C G T A A C T G C G T A A C G T A C T G C G T A A C G T A C G T C G T A
C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A

PH0037.1_Hdx/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TAGATGATTA------
TNNNATGATTTCNNCNN
 A C G T A G C T C G T A A C T G C G T A A C G T A C T G C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

Dux/MA0611.1/Jaspar

Match Rank:6
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TAGATGATTA-
---TTGATTGN
 A G C T C G T A A C T G C G T A A C G T A C T G C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:7
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TAGATGATTA-
---RGGATTAR
 A G C T C G T A A C T G C G T A A C G T A C T G C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

POU6F2/MA0793.1/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TAGATGATTA-
-AGCTCATTAT
 A G C T C G T A A C T G C G T A A C G T A C T G C G T A A C G T A C G T C G T A A C G T
A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

GSC2/MA0891.1/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TAGATGATTA--
--GNGGATTAGN
 A G C T C G T A A C T G C G T A A C G T A C T G C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G

OTX2/MA0712.1/Jaspar

Match Rank:10
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TAGATGATTA-
---NGGATTAA
 A G C T C G T A A C T G C G T A A C G T A C T G C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A