Information for 5-GCTGTTCTCG (Motif 15)

A C T G A G T C C G A T A C T G C A G T A C G T A G T C A G C T A T G C C A T G
Reverse Opposite:
G T A C T A C G C T G A A C T G G T C A G C T A A G T C C G T A A C T G A G T C
p-value:1e-7
log p-value:-1.653e+01
Information Content per bp:1.848
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif68.3
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets38.0 +/- 15.6bp
Average Position of motif in Background51.3 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GCTGTTCTCG-
-CTGTTCCTGG
 A C T G A G T C C G A T A C T G C A G T A C G T A G T C A G C T A T G C C A T G A C G T
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

PB0138.1_Irf4_2/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCTGTTCTCG-----
AGTATTCTCGGTTGC
 A C T G A G T C C G A T A C T G C A G T A C G T A G T C A G C T A T G C C A T G A C G T A C G T A C G T A C G T A C G T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCTGTTCTCG-----
NNAATTCTCGNTNAN
 A C T G A G T C C G A T A C T G C A G T A C G T A G T C A G C T A T G C C A T G A C G T A C G T A C G T A C G T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCTGTTCTCG
CAGCTGTT----
 A C G T A C G T A C T G A G T C C G A T A C T G C A G T A C G T A G T C A G C T A T G C C A T G
A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCTGTTCTCG
GCTGTG----
 A C T G A G T C C G A T A C T G C A G T A C G T A G T C A G C T A T G C C A T G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCTGTTCTCG
TKCTGTTCCA-
 A C G T A C T G A G T C C G A T A C T G C A G T A C G T A G T C A G C T A T G C C A T G
A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T

TFAP4/MA0691.1/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GCTGTTCTCG
ATCAGCTGTT----
 A C G T A C G T A C G T A C G T A C T G A G T C C G A T A C T G C A G T A C G T A G T C A G C T A T G C C A T G
T C G A G C A T A T G C C G T A A T C G T A G C A C G T A C T G C G A T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCTGTTCTCG
NGCTN------
 A C G T A C T G A G T C C G A T A C T G C A G T A C G T A G T C A G C T A T G C C A T G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GCTGTTCTCG
CCAGCTGTTN---
 A C G T A C G T A C G T A C T G A G T C C G A T A C T G C A G T A C G T A G T C A G C T A T G C C A T G
T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCTGTTCTCG
ACAGCTGTTV---
 A C G T A C G T A C G T A C T G A G T C C G A T A C T G C A G T A C G T A G T C A G C T A T G C C A T G
T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A A C G T A C G T A C G T