Information for 12-ATCTGTCAGATYT (Motif 12)

C G T A C G A T A G T C C G A T T C A G C G A T A G T C C G T A C T A G G T C A C G A T G A C T C G A T
Reverse Opposite:
C G T A C T G A C G T A A C G T A G T C A C G T C T A G C G T A A G T C C G T A A C T G C G T A C G A T
p-value:1e-9
log p-value:-2.149e+01
Information Content per bp:1.749
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.9 +/- 24.6bp
Average Position of motif in Background13.4 +/- 9.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0102.1_Meis1/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ATCTGTCAGATYT
AACGAGCTGTCAATAC-
 A C G T A C G T A C G T A C G T C G T A C G A T A G T C C G A T T C A G C G A T A G T C C G T A C T A G G T C A C G A T G A C T C G A T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C A C G T

Myb/MA0100.2/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ATCTGTCAGATYT
CCAACTGCCA-----
 A C G T A C G T C G T A C G A T A G T C C G A T T C A G C G A T A G T C C G T A C T A G G T C A C G A T G A C T C G A T
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T A C G T A C G T A C G T A C G T

PH0104.1_Meis2/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ATCTGTCAGATYT
AAAGACCTGTCAATAC-
 A C G T A C G T A C G T A C G T C G T A C G A T A G T C C G A T T C A G C G A T A G T C C G T A C T A G G T C A C G A T G A C T C G A T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ATCTGTCAGATYT
-RHTGWCAR----
 C G T A C G A T A G T C C G A T T C A G C G A T A G T C C G T A C T A G G T C A C G A T G A C T C G A T
A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ATCTGTCAGATYT
AACTAGCTGTCAATAC-
 A C G T A C G T A C G T A C G T C G T A C G A T A G T C C G A T T C A G C G A T A G T C C G T A C T A G G T C A C G A T G A C T C G A T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----ATCTGTCAGATYT
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C G T C G T A C G A T A G T C C G A T T C A G C G A T A G T C C G T A C T A G G T C A C G A T G A C T C G A T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ATCTGTCAGATYT
---TGTCANYT--
 C G T A C G A T A G T C C G A T T C A G C G A T A G T C C G T A C T A G G T C A C G A T G A C T C G A T
A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----ATCTGTCAGATYT
AAAGACCTGTCAATCC-
 A C G T A C G T A C G T A C G T C G T A C G A T A G T C C G A T T C A G C G A T A G T C C G T A C T A G G T C A C G A T G A C T C G A T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C A C G T

PH0105.1_Meis3/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----ATCTGTCAGATYT
AATTACCTGTCAATAC-
 A C G T A C G T A C G T A C G T C G T A C G A T A G T C C G A T T C A G C G A T A G T C C G T A C T A G G T C A C G A T G A C T C G A T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ATCTGTCAGATYT
-GCTGTCAA----
 C G T A C G A T A G T C C G A T T C A G C G A T A G T C C G T A C T A G G T C A C G A T G A C T C G A T
A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T