Information for 8-TGCTATAAAT (Motif 8)

A C G T A T C G A T G C C G A T T G C A A C G T C T G A C G T A T C G A C G A T
Reverse Opposite:
C G T A A G C T A C G T G A C T G T C A A C G T C G T A A T C G A T G C C G T A
p-value:1e-9
log p-value:-2.230e+01
Information Content per bp:1.841
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.71%
Number of Background Sequences with motif79.0
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets52.2 +/- 30.9bp
Average Position of motif in Background49.2 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2B/MA0660.1/Jaspar

Match Rank:1
Score:0.75
Offset:1
Orientation:forward strand
Alignment:TGCTATAAAT---
-GCTATAAATAGC
 A C G T A T C G A T G C C G A T T G C A A C G T C T G A C G T A T C G A C G A T A C G T A C G T A C G T
A C G T C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

Hoxc9/MA0485.1/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:forward strand
Alignment:TGCTATAAAT---
GGCCATAAATCAC
 A C G T A T C G A T G C C G A T T G C A A C G T C T G A C G T A T C G A C G A T A C G T A C G T A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C

MEF2A/MA0052.3/Jaspar

Match Rank:3
Score:0.74
Offset:1
Orientation:forward strand
Alignment:TGCTATAAAT---
-TCTAAAAATAGA
 A C G T A T C G A T G C C G A T T G C A A C G T C T G A C G T A T C G A C G A T A C G T A C G T A C G T
A C G T C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

MEF2D/MA0773.1/Jaspar

Match Rank:4
Score:0.73
Offset:1
Orientation:forward strand
Alignment:TGCTATAAAT---
-ACTATAAATAGA
 A C G T A T C G A T G C C G A T T G C A A C G T C T G A C G T A T C G A C G A T A C G T A C G T A C G T
A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:5
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TGCTATAAAT--
GGCCATAAATCA
 A C G T A T C G A T G C C G A T T G C A A C G T C T G A C G T A T C G A C G A T A C G T A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A

TBP/MA0108.2/Jaspar

Match Rank:6
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TGCTATAAAT-------
--GTATAAAAGGCGGGG
 A C G T A T C G A T G C C G A T T G C A A C G T C T G A C G T A T C G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

POL012.1_TATA-Box/Jaspar

Match Rank:7
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TGCTATAAAT-------
--GTATAAAAGGCGGGG
 A C G T A T C G A T G C C G A T T G C A A C G T C T G A C G T A T C G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:8
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TGCTATAAAT---
-GCTAAAAATAGC
 A C G T A T C G A T G C C G A T T G C A A C G T C T G A C G T A T C G A C G A T A C G T A C G T A C G T
A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:9
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TGCTATAAAT--
GGCCATAAATCA
 A C G T A T C G A T G C C G A T T G C A A C G T C T G A C G T A T C G A C G A T A C G T A C G T
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:10
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TGCTATAAAT--
NGYCATAAAWCH
 A C G T A T C G A T G C C G A T T G C A A C G T C T G A C G T A T C G A C G A T A C G T A C G T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A