Information for 4-GGAGGCAGCAGAGASC (Motif 2)

C T A G T C A G C G T A C A T G C A T G G T A C C G T A A T C G T G A C C G T A T C A G T C G A C T A G G T C A A T C G G T A C
Reverse Opposite:
A C T G T A G C C A G T A G T C A G C T A G T C G C A T A C T G A T G C G C A T A C T G G A T C G T A C G C A T A G T C A G T C
p-value:1e-23
log p-value:-5.376e+01
Information Content per bp:1.664
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif3.78%
Number of Background Sequences with motif162.7
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets46.9 +/- 22.9bp
Average Position of motif in Background52.0 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGAGGCAGCAGAGASC
TGAGTCAGCA------
 C T A G T C A G C G T A C A T G C A T G G T A C C G T A A T C G T G A C C G T A T C A G T C G A C T A G G T C A A T C G G T A C
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGAGGCAGCAGAGASC
NGNGACAGCTGCN---
 C T A G T C A G C G T A C A T G C A T G G T A C C G T A A T C G T G A C C G T A T C A G T C G A C T A G G T C A A T C G G T A C
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GGAGGCAGCAGAGASC
---CGCAGCTGCG---
 C T A G T C A G C G T A C A T G C A T G G T A C C G T A A T C G T G A C C G T A T C A G T C G A C T A G G T C A A T C G G T A C
A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GGAGGCAGCAGAGASC
---ANCAGCTG-----
 C T A G T C A G C G T A C A T G C A T G G T A C C G T A A T C G T G A C C G T A T C A G T C G A C T A G G T C A A T C G G T A C
A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GGAGGCAGCAGAGASC
---GACAGCTGCAG--
 C T A G T C A G C G T A C A T G C A T G G T A C C G T A A T C G T G A C C G T A T C A G T C G A C T A G G T C A A T C G G T A C
A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GGAGGCAGCAGAGASC
---GTCAGCANNTN--
 C T A G T C A G C G T A C A T G C A T G G T A C C G T A A T C G T G A C C G T A T C A G T C G A C T A G G T C A A T C G G T A C
A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGAGGCAGCAGAGASC
AGGAAACAGCTG-----
 A C G T C T A G T C A G C G T A C A T G C A T G G T A C C G T A A T C G T G A C C G T A T C A G T C G A C T A G G T C A A T C G G T A C
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGAGGCAGCAGAGASC
TNNGGGCAG--------
 A C G T C T A G T C A G C G T A C A T G C A T G G T A C C G T A A T C G T G A C C G T A T C A G T C G A C T A G G T C A A T C G G T A C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GGAGGCAGCAGAGASC
---NGAAGC-------
 C T A G T C A G C G T A C A T G C A T G G T A C C G T A A T C G T G A C C G T A T C A G T C G A C T A G G T C A A T C G G T A C
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GGAGGCAGCAGAGASC-
--DCHCAGCAGGRGGCC
 C T A G T C A G C G T A C A T G C A T G G T A C C G T A A T C G T G A C C G T A T C A G T C G A C T A G G T C A A T C G G T A C A C G T
A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C