Information for 12-GGCAGTATTG (Motif 17)

A C T G A C T G A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A C G T C G T A A G T C A C G T A C T G A G T C A G T C
p-value:1e-6
log p-value:-1.468e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.2 +/- 18.2bp
Average Position of motif in Background69.3 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGCAGTATTG-
NNTNNCAATATTAG
 A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C T G A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGCAGTATTG-
NNTNNCAATATTAG
 A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C T G A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GGCAGTATTG
TNNGGGCAG-----
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C T G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGCAGTATTG
TGGCAGTTGN-
 A C G T A C T G A C T G A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C T G
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T

ETV6/MA0645.1/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GGCAGTATTG
AGCGGAAGTG---
 A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C T G
T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G A C G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GGCAGTATTG--
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C T G A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

EHF/MA0598.2/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GGCAGTATTG
AACCCGGAAGTA---
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C T G
G C T A G C T A T A G C T A G C T G A C T C A G A C T G G T C A T G C A T C A G G A C T C T G A A C G T A C G T A C G T

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:8
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GGCAGTATTG
ACVAGGAAGT----
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C T G
G C T A A G T C T A C G T G C A A T C G T C A G G C T A T C G A T C A G A G C T A C G T A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GGCAGTATTG
-TCAGTCTT-
 A C T G A C T G A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C T G
A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:10
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------GGCAGTATTG
TTAAGAGGAAGTTA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C T G
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C A C G T A C G T