Information for 5-GGGGTTTGCCCGGCAC (Motif 5)

A T C G A C T G A C T G A C T G C G A T A C G T A C G T A C T G A T G C A G T C G T A C A C T G A C T G A T G C G T C A A G T C
Reverse Opposite:
A C T G A C G T A T C G A G T C A G T C A C T G C T A G T A C G A G T C C G T A C G T A C G T A A G T C A G T C A G T C A T G C
p-value:1e-13
log p-value:-3.067e+01
Information Content per bp:1.892
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 20.5bp
Average Position of motif in Background65.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGGGTTTGCCCGGCAC
GGGGATTTCC------
 A T C G A C T G A C T G A C T G C G A T A C G T A C G T A C T G A T G C A G T C G T A C A C T G A C T G A T G C G T C A A G T C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGGGTTTGCCCGGCAC
GGGGATTCCCCC----
 A T C G A C T G A C T G A C T G C G A T A C G T A C G T A C T G A T G C A G T C G T A C A C T G A C T G A T G C G T C A A G T C
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T A C G T A C G T A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGGGTTTGCCCGGCAC
GGGGGTGTGTCC-----
 A C G T A T C G A C T G A C T G A C T G C G A T A C G T A C G T A C T G A T G C A G T C G T A C A C T G A C T G A T G C G T C A A G T C
T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C A C G T A C G T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGGGTTTGCCCGGCAC
GGGGCTYGKCTGGGA-
 A T C G A C T G A C T G A C T G C G A T A C G T A C G T A C T G A T G C A G T C G T A C A C T G A C T G A T G C G T C A A G T C
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGGGTTTGCCCGGCAC
NGGGGATTTCCC-----
 A C G T A T C G A C T G A C T G A C T G C G A T A C G T A C G T A C T G A T G C A G T C G T A C A C T G A C T G A T G C G T C A A G T C
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T A C G T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGGGTTTGCCCGGCAC
AGGGGAATCCCCT----
 A C G T A T C G A C T G A C T G A C T G C G A T A C G T A C G T A C T G A T G C A G T C G T A C A C T G A C T G A T G C G T C A A G T C
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGGGTTTGCCCGGCAC
GGGGATTTCC------
 A T C G A C T G A C T G A C T G C G A T A C G T A C G T A C T G A T G C A G T C G T A C A C T G A C T G A T G C G T C A A G T C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGGGTTTGCCCGGCAC
AGGGGAATCCCCT----
 A C G T A T C G A C T G A C T G A C T G C G A T A C G T A C G T A C T G A T G C A G T C G T A C A C T G A C T G A T G C G T C A A G T C
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGGGTTTGCCCGGCAC
NTGGGTGTGGCC-----
 A C G T A T C G A C T G A C T G A C T G C G A T A C G T A C G T A C T G A T G C A G T C G T A C A C T G A C T G A T G C G T C A A G T C
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C A C G T A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGGGTTTGCCCGGCAC
GGGAATTTCC------
 A T C G A C T G A C T G A C T G C G A T A C G T A C G T A C T G A T G C A G T C G T A C A C T G A C T G A T G C G T C A A G T C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T