Information for 3-AGGGGGCGCTGTTKGC (Motif 3)

C G T A A C T G C T A G C T A G A C T G A C T G G T A C A C T G A G T C A C G T A C T G A C G T G A C T A C G T A T C G G A T C
Reverse Opposite:
C T A G A T G C T G C A C T G A T G C A A G T C C G T A A C T G G T A C A C T G G T A C A G T C A G T C A G T C A G T C A C G T
p-value:1e-26
log p-value:-5.990e+01
Information Content per bp:1.799
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.9 +/- 14.7bp
Average Position of motif in Background23.4 +/- 3.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------AGGGGGCGCTGTTKGC
GCCASCAGGGGGCGCYVNNG--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C T A G C T A G A C T G A C T G G T A C A C T G A G T C A C G T A C T G A C G T G A C T A C G T A T C G G A T C
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----AGGGGGCGCTGTTKGC
NNNAAGGGGGCGGGNNN---
 A C G T A C G T A C G T A C G T C G T A A C T G C T A G C T A G A C T G A C T G G T A C A C T G A G T C A C G T A C T G A C G T G A C T A C G T A T C G G A T C
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.61
Offset:-8
Orientation:forward strand
Alignment:--------AGGGGGCGCTGTTKGC
TGGCCACCAGGGGGCGCTA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C T A G C T A G A C T G A C T G G T A C A C T G A G T C A C G T A C T G A C G T G A C T A C G T A T C G G A T C
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T A C G T A C G T A C G T A C G T

SP4/MA0685.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGGGGGCGCTGTTKGC
NAAGGGGGCGTGGCTTN-
 A C G T A C G T C G T A A C T G C T A G C T A G A C T G A C T G G T A C A C T G A G T C A C G T A C T G A C G T G A C T A C G T A T C G G A T C
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A A C G T

INSM1/MA0155.1/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AGGGGGCGCTGTTKGC
TGTCAGGGGGCG--------
 A C G T A C G T A C G T A C G T C G T A A C T G C T A G C T A G A C T G A C T G G T A C A C T G A G T C A C G T A C T G A C G T G A C T A C G T A T C G G A T C
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGGGGGCGCTGTTKGC
AGGGGGCGGGGCTG--
 C G T A A C T G C T A G C T A G A C T G A C T G G T A C A C T G A G T C A C G T A C T G A C G T G A C T A C G T A T C G G A T C
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T

SP8/MA0747.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGGGGGCGCTGTTKGC
AGTGGGCGTGGC----
 C G T A A C T G C T A G C T A G A C T G A C T G G T A C A C T G A G T C A C G T A C T G A C G T G A C T A C G T A T C G G A T C
C T G A T C A G A C G T T C A G A T C G A T C G T G A C C A T G C A G T C A T G C A T G A G T C A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.59
Offset:-8
Orientation:reverse strand
Alignment:--------AGGGGGCGCTGTTKGC
TGGCCACCAGGTGGCACTNT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C T A G C T A G A C T G A C T G G T A C A C T G A G T C A C G T A C T G A C G T G A C T A C G T A T C G G A T C
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGGGGGCGCTGTTKGC
RGKGGGCGGAGC----
 C G T A A C T G C T A G C T A G A C T G A C T G G T A C A C T G A G T C A C G T A C T G A C G T G A C T A C G T A T C G G A T C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGGGGGCGCTGTTKGC
AAGGKGRCGCAGGCA--
 A C G T C G T A A C T G C T A G C T A G A C T G A C T G G T A C A C T G A G T C A C G T A C T G A C G T G A C T A C G T A T C G G A T C
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T