Information for 11-GGTGCACAGAGCA (Motif 15)

A C T G T C A G C G A T A C T G A G T C C G T A A T G C C G T A A T C G C G T A A C T G A G T C C T G A
Reverse Opposite:
A G C T A C T G A G T C A C G T A T G C A C G T A T C G A C G T A C T G A G T C C G T A A G T C A G T C
p-value:1e-6
log p-value:-1.598e+01
Information Content per bp:1.925
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.9 +/- 23.7bp
Average Position of motif in Background34.9 +/- 14.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GGTGCACAGAGCA
TACATGTGCACATAAAA
 A C G T A C G T A C G T A C G T A C T G T C A G C G A T A C T G A G T C C G T A A T G C C G T A A T C G C G T A A C T G A G T C C T G A
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGTGCACAGAGCA
AGAGTCCAAAGTCCA
 A C G T A C G T A C T G T C A G C G A T A C T G A G T C C G T A A T G C C G T A A T C G C G T A A C T G A G T C C T G A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGTGCACAGAGCA
CANAGNNCAAAGTCCA
 A C G T A C G T A C G T A C T G T C A G C G A T A C T G A G T C C G T A A T G C C G T A A T C G C G T A A C T G A G T C C T G A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

MTF1/MA0863.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGTGCACAGAGCA-
TTTGCACACGGCAC
 A C T G T C A G C G A T A C T G A G T C C G T A A T G C C G T A A T C G C G T A A C T G A G T C C T G A A C G T
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C

PB0026.1_Gm397_1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GGTGCACAGAGCA
CAGATGTGCACATACGT
 A C G T A C G T A C G T A C G T A C T G T C A G C G A T A C T G A G T C C G T A A T G C C G T A A T C G C G T A A C T G A G T C C T G A
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGTGCACAGAGCA
TGGGGCAAAGGTCA
 A C G T A C T G T C A G C G A T A C T G A G T C C G T A A T G C C G T A A T C G C G T A A C T G A G T C C T G A
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PB0199.1_Zfp161_2/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGTGCACAGAGCA-
GCCGCGCAGTGCGT
 A C T G T C A G C G A T A C T G A G T C C G T A A T G C C G T A A T C G C G T A A C T G A G T C C T G A A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGTGCACAGAGCA
TAGGGCAAAGGTCA
 A C G T A C T G T C A G C G A T A C T G A G T C C G T A A T G C C G T A A T C G C G T A A C T G A G T C C T G A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

PB0208.1_Zscan4_2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGTGCACAGAGCA--
CGAAGCACACAAAATA
 A C G T A C T G T C A G C G A T A C T G A G T C C G T A A T G C C G T A A T C G C G T A A C T G A G T C C T G A A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGTGCACAGAGCA
GTAGGGCAAAGGTCA
 A C G T A C G T A C T G T C A G C G A T A C T G A G T C C G T A A T G C C G T A A T C G C G T A A C T G A G T C C T G A
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A