Information for 8-GTCACTGAAA (Motif 14)

T A C G C A G T G A T C C G T A A G T C A G C T T A C G G C T A G T C A G C T A
Reverse Opposite:
C G A T C A G T C G A T A T G C T C G A T C A G G C A T C T A G G T C A A T G C
p-value:1e-7
log p-value:-1.777e+01
Information Content per bp:1.668
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif4.89%
Number of Background Sequences with motif866.0
Percentage of Background Sequences with motif1.83%
Average Position of motif in Targets44.5 +/- 27.4bp
Average Position of motif in Background49.7 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GTCACTGAAA---
---ACTGAAACCA
 T A C G C A G T G A T C C G T A A G T C A G C T T A C G G C T A G T C A G C T A A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

PB0005.1_Bbx_1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GTCACTGAAA--
NANTTCATTGAATTA
 A C G T A C G T A C G T T A C G C A G T G A T C C G T A A G T C A G C T T A C G G C T A G T C A G C T A A C G T A C G T
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GTCACTGAAA----
CAATCACTGGCAGAAT
 A C G T A C G T T A C G C A G T G A T C C G T A A G T C A G C T T A C G G C T A G T C A G C T A A C G T A C G T A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

Pax2/MA0067.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GTCACTGAAA
AGTCACGC---
 A C G T T A C G C A G T G A T C C G T A A G T C A G C T T A C G G C T A G T C A G C T A
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GTCACTGAAA
NCTGTCAATCAN-
 A C G T A C G T A C G T T A C G C A G T G A T C C G T A A G T C A G C T T A C G G C T A G T C A G C T A
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GTCACTGAAA
SCTGTCAVTCAV-
 A C G T A C G T A C G T T A C G C A G T G A T C C G T A A G T C A G C T T A C G G C T A G T C A G C T A
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTCACTGAAA-----
TTGAATGAAATTCGA
 T A C G C A G T G A T C C G T A A G T C A G C T T A C G G C T A G T C A G C T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTCACTGAAA--
GAAAGTGAAAGT
 T A C G C A G T G A T C C G T A A G T C A G C T T A C G G C T A G T C A G C T A A C G T A C G T
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTCACTGAAA--
GAAACTGAAACT
 T A C G C A G T G A T C C G T A A G T C A G C T T A C G G C T A G T C A G C T A A C G T A C G T
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:10
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GTCACTGAAA
GSCTGTCACTCA--
 A C G T A C G T A C G T A C G T T A C G C A G T G A T C C G T A A G T C A G C T T A C G G C T A G T C A G C T A
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T