Information for 10-CSTMTSGCSAKAS (Motif 13)

A G T C A T G C A C G T G T A C A C G T A T G C A C T G A G T C A T C G C G T A A C T G C G T A T A C G
Reverse Opposite:
A T G C A C G T G T A C A C G T A T G C A C T G A G T C A T C G C G T A A C T G C G T A T A C G A C T G
p-value:1e-8
log p-value:-1.924e+01
Information Content per bp:1.825
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.5 +/- 28.9bp
Average Position of motif in Background79.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFX(?)/Promoter/Homer

Match Rank:1
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:CSTMTSGCSAKAS-
--TCTCGCGAGAAT
 A G T C A T G C A C G T G T A C A C G T A T G C A C T G A G T C A T C G C G T A A C T G C G T A T A C G A C G T
A C G T A C G T G A C T T G A C A C G T T A G C C A T G A G T C C A T G T C G A A C T G T C G A C T G A A G C T

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CSTMTSGCSAKAS--
GTTCTCGCGAGANCC
 A G T C A T G C A C G T G T A C A C G T A T G C A C T G A G T C A T C G C G T A A C T G C G T A T A C G A C G T A C G T
T A C G G A C T G A C T T G A C A G C T A G T C C A T G G T A C A C T G T C G A A C T G T C G A A C G T A G T C A T G C

ZBTB33/MA0527.1/Jaspar

Match Rank:3
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CSTMTSGCSAKAS---
-CTCTCGCGAGATCTG
 A G T C A T G C A C G T G T A C A C G T A T G C A C T G A G T C A T C G C G T A A C T G C G T A T A C G A C G T A C G T A C G T
A C G T A G T C A G C T T G A C G A C T A G T C C T A G G A T C A C T G T C G A A C T G T C G A A G C T A G T C A G C T A T C G

ZBED1/MA0749.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CSTMTSGCSAKAS
TATGTCGCGATAG
 A G T C A T G C A C G T G T A C A C G T A T G C A C T G A G T C A T C G C G T A A C T G C G T A T A C G
G A C T T G C A C G A T C T A G A G C T A G T C C T A G A G T C T C A G C T G A A G C T G C T A C A T G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CSTMTSGCSAKAS
VBSYGTCTGG------
 A C G T A C G T A C G T A G T C A T G C A C G T G T A C A C G T A T G C A C T G A G T C A T C G C G T A A C T G C G T A T A C G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

NEUROD2/MA0668.1/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CSTMTSGCSAKAS
ACCATATGGC-----
 A C G T A C G T A G T C A T G C A C G T G T A C A C G T A T G C A C T G A G T C A T C G C G T A A C T G C G T A T A C G
C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C A C G T A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CSTMTSGCSAKAS
SCCTSAGGSCAW--
 A C G T A G T C A T G C A C G T G T A C A C G T A T G C A C T G A G T C A T C G C G T A A C T G C G T A T A C G
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CSTMTSGCSAKAS
CTGTCTGG------
 A C G T A G T C A T G C A C G T G T A C A C G T A T G C A C T G A G T C A T C G C G T A A C T G C G T A T A C G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CSTMTSGCSAKAS
ATTGCCTGAGGCAAT--
 A C G T A C G T A C G T A C G T A G T C A T G C A C G T G T A C A C G T A T G C A C T G A G T C A T C G C G T A A C T G C G T A T A C G
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CSTMTSGCSAKAS
GCCTCAGGGCAT--
 A C G T A G T C A T G C A C G T G T A C A C G T A T G C A C T G A G T C A T C G C G T A A C T G C G T A T A C G
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T