Information for 8-ACACAAVACAACC (Motif 7)

C G T A A G T C G T C A A G T C G T C A C G T A T A G C C G T A A G T C C G T A C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T G C A T C T A G C G A T A C T G A C G T A C G T A C T G A C G T C T A G A C G T
p-value:1e-12
log p-value:-2.836e+01
Information Content per bp:1.844
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.0 +/- 28.2bp
Average Position of motif in Background83.8 +/- 11.7bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RREB1/MA0073.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ACACAAVACAACC-------
CCCCAAACCACCCCCCCCCA
 C G T A A G T C G T C A A G T C G T C A C G T A T A G C C G T A A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------ACACAAVACAACC
CGAAGCACACAAAATA---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C G T C A A G T C G T C A C G T A T A G C C G T A A G T C C G T A C G T A A G T C A G T C
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ACACAAVACAACC
AAGATAAGATAACA
 A C G T C G T A A G T C G T C A A G T C G T C A C G T A T A G C C G T A A G T C C G T A C G T A A G T C A G T C
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

PB0120.1_Foxj1_2/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ACACAAVACAACC
ATGTCACAACAACAC-
 A C G T A C G T A C G T C G T A A G T C G T C A A G T C G T C A C G T A T A G C C G T A A G T C C G T A C G T A A G T C A G T C
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ACACAAVACAACC
CTCACACAATGGCGC-
 A C G T A C G T A C G T C G T A A G T C G T C A A G T C G T C A C G T A T A G C C G T A A G T C C G T A C G T A A G T C A G T C
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----ACACAAVACAACC
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T C G T A A G T C G T C A A G T C G T C A C G T A T A G C C G T A A G T C C G T A C G T A A G T C A G T C
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0141.1_Isgf3g_2/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:ACACAAVACAACC-
GCAAAACATTACTA
 C G T A A G T C G T C A A G T C G T C A C G T A T A G C C G T A A G T C C G T A C G T A A G T C A G T C A C G T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----ACACAAVACAACC--
AGTAAACAAAAAAGAACANN
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C G T C A A G T C G T C A C G T A T A G C C G T A A G T C C G T A C G T A A G T C A G T C A C G T A C G T
C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:ACACAAVACAACC-
--ACAAAGGNBCCT
 C G T A A G T C G T C A A G T C G T C A C G T A T A G C C G T A A G T C C G T A C G T A A G T C A G T C A C G T
A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

PB0166.1_Sox12_2/Jaspar

Match Rank:10
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----ACACAAVACAACC
AAACAGACAAAGGAAT-
 A C G T A C G T A C G T A C G T C G T A A G T C G T C A A G T C G T C A C G T A T A G C C G T A A G T C C G T A C G T A A G T C A G T C
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T