Information for 13-GTCTGCAGGATCC (Motif 16)

A C T G A C G T G A T C C G A T A C T G A G T C C G T A A C T G A C T G C G T A A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C G T A G T C A G T C A C G T A C T G A G T C C G T A C T A G G T C A A G T C
p-value:1e-8
log p-value:-1.896e+01
Information Content per bp:1.930
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.8 +/- 36.3bp
Average Position of motif in Background30.1 +/- 15.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GTCTGCAGGATCC
---ANCAGGATGT
 A C T G A C G T G A T C C G A T A C T G A G T C C G T A A C T G A C T G C G T A A C G T A G T C A G T C
A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTCTGCAGGATCC-
DCHCAGCAGGRGGCC
 A C G T A C T G A C G T G A T C C G A T A C T G A G T C C G T A A C T G A C T G C G T A A C G T A G T C A G T C A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

NRL/MA0842.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GTCTGCAGGATCC
GTCAGCANNTN--
 A C T G A C G T G A T C C G A T A C T G A G T C C G T A A C T G A C T G C G T A A C G T A G T C A G T C
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GTCTGCAGGATCC
VBSYGTCTGG-------
 A C G T A C G T A C G T A C G T A C T G A C G T G A T C C G A T A C T G A G T C C G T A A C T G A C T G C G T A A C G T A G T C A G T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GTCTGCAGGATCC
NGTCAGCANTTT--
 A C G T A C T G A C G T G A T C C G A T A C T G A G T C C G T A A C T G A C T G C G T A A C G T A G T C A G T C
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GTCTGCAGGATCC
TGAGTCAGCA------
 A C G T A C G T A C G T A C T G A C G T G A T C C G A T A C T G A G T C C G T A A C T G A C T G C G T A A C G T A G T C A G T C
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GTCTGCAGGATCC
DCTCAGCAGG----
 A C G T A C T G A C G T G A T C C G A T A C T G A G T C C G T A A C T G A C T G C G T A A C G T A G T C A G T C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GTCTGCAGGATCC
CTGTCTGG-------
 A C G T A C G T A C T G A C G T G A T C C G A T A C T G A G T C C G T A A C T G A C T G C G T A A C G T A G T C A G T C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:9
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----GTCTGCAGGATCC
NCTANGTCAGCAAATTT-
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T G A T C C G A T A C T G A G T C C G T A A C T G A C T G C G T A A C G T A G T C A G T C
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GTCTGCAGGATCC
TWGTCTGV-------
 A C G T A C G T A C T G A C G T G A T C C G A T A C T G A G T C C G T A A C T G A C T G C G T A A C G T A G T C A G T C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T