Information for 4-TGCTGCTCTC (Motif 3)

A C G T A C T G A T G C C A G T A C T G A G T C G A C T G T A C G C A T A G T C
Reverse Opposite:
A C T G C G T A A C T G C T G A T C A G A G T C G T C A T A C G A G T C T G C A
p-value:1e-19
log p-value:-4.443e+01
Information Content per bp:1.706
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif5.92%
Number of Background Sequences with motif593.2
Percentage of Background Sequences with motif1.25%
Average Position of motif in Targets54.0 +/- 26.6bp
Average Position of motif in Background51.1 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGCTGCTCTC--
AGATGCTRCTRCCHT
 A C G T A C G T A C G T A C G T A C T G A T G C C A G T A C T G A G T C G A C T G T A C G C A T A G T C A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGCTGCTCTC
TGGGGCCCAC
 A C G T A C T G A T G C C A G T A C T G A G T C G A C T G T A C G C A T A G T C
G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C

PB0044.1_Mtf1_1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGCTGCTCTC-----
NNTTTGCACACGGCCC
 A C G T A C G T A C T G A T G C C A G T A C T G A G T C G A C T G T A C G C A T A G T C A C G T A C G T A C G T A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGCTGCTCTC
CNGTCCTCCC
 A C G T A C T G A T G C C A G T A C T G A G T C G A C T G T A C G C A T A G T C
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTGCTCTC
NNTCCTGCTGTGNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C C A G T A C T G A G T C G A C T G T A C G C A T A G T C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGCTGCTCTC
CAGCTGNT---
 A C G T A C G T A C T G A T G C C A G T A C T G A G T C G A C T G T A C G C A T A G T C
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TGCTGCTCTC
AGCAGCTGCT---
 A C G T A C G T A C G T A C G T A C T G A T G C C A G T A C T G A G T C G A C T G T A C G C A T A G T C
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:8
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTGCTCTC
NNAGCAGCTGCT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C C A G T A C T G A G T C G A C T G T A C G C A T A G T C
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TGCTGCTCTC
AATTTGCTGAC---
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C C A G T A C T G A G T C G A C T G T A C G C A T A G T C
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGCTGCTCTC
NGCTN-----
 A C G T A C T G A T G C C A G T A C T G A G T C G A C T G T A C G C A T A G T C
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T