Information for 5-TSWGCCACSARRGARG (Motif 7)

A C G T A T G C C G T A A C T G A G T C A G T C C G T A A G T C A T G C C G T A C T A G C T A G A C T G G T C A C T G A C T A G
Reverse Opposite:
A G T C A G C T A C G T A G T C A G T C A G T C A C G T A T C G A C T G A C G T A C T G A C T G A G T C C G A T A T C G G T C A
p-value:1e-10
log p-value:-2.467e+01
Information Content per bp:1.847
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.5 +/- 18.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:1
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TSWGCCACSARRGARG
--TGCCCTNAGGGCA-
 A C G T A T G C C G T A A C T G A G T C A G T C C G T A A G T C A T G C C G T A C T A G C T A G A C T G G T C A C T G A C T A G
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:2
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TSWGCCACSARRGARG
--TGCCCNNAGGGCA-
 A C G T A T G C C G T A A C T G A G T C A G T C C G T A A G T C A T G C C G T A C T A G C T A G A C T G G T C A C T G A C T A G
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:3
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TSWGCCACSARRGARG
--TGCCCTGAGGGCA-
 A C G T A T G C C G T A A C T G A G T C A G T C C G T A A G T C A T G C C G T A C T A G C T A G A C T G G T C A C T G A C T A G
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TSWGCCACSARRGARG
CGTGCCAAG-------
 A C G T A T G C C G T A A C T G A G T C A G T C C G T A A G T C A T G C C G T A C T A G C T A G A C T G G T C A C T G A C T A G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:TSWGCCACSARRGARG
--TGCCAA--------
 A C G T A T G C C G T A A C T G A G T C A G T C C G T A A G T C A T G C C G T A C T A G C T A G A C T G G T C A C T G A C T A G
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:6
Score:0.50
Offset:2
Orientation:forward strand
Alignment:TSWGCCACSARRGARG
--ATCCAC--------
 A C G T A T G C C G T A A C T G A G T C A G T C C G T A A G T C A T G C C G T A C T A G C T A G A C T G G T C A C T G A C T A G
A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.50
Offset:2
Orientation:forward strand
Alignment:TSWGCCACSARRGARG
--NGTCCCNNGGGA--
 A C G T A T G C C G T A A C T G A G T C A G T C C G T A A G T C A T G C C G T A C T A G C T A G A C T G G T C A C T G A C T A G
A C G T A C G T C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--TSWGCCACSARRGARG
TGTCTGDCACCT------
 A C G T A C G T A C G T A T G C C G T A A C T G A G T C A G T C C G T A A G T C A T G C C G T A C T A G C T A G A C T G G T C A C T G A C T A G
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:9
Score:0.49
Offset:1
Orientation:forward strand
Alignment:TSWGCCACSARRGARG----
-TGGCCACCAGGGGGCGCTA
 A C G T A T G C C G T A A C T G A G T C A G T C C G T A A G T C A T G C C G T A C T A G C T A G A C T G G T C A C T G A C T A G A C G T A C G T A C G T A C G T
A C G T G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:TSWGCCACSARRGARG-------
---GCCASCAGGGGGCGCYVNNG
 A C G T A T G C C G T A A C T G A G T C A G T C C G T A A G T C A T G C C G T A C T A G C T A G A C T G G T C A C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G