Information for 9-TTCAAGTGCTCTG (Motif 6)

A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A G T C A G C T A G T C A G C T A C T G
Reverse Opposite:
A G T C C T G A A C T G C T G A A C T G A G T C C G T A A G T C A C G T C G A T A C T G C G T A T G C A
p-value:1e-10
log p-value:-2.467e+01
Information Content per bp:1.931
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.4 +/- 28.9bp
Average Position of motif in Background34.3 +/- 6.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-8/MA0673.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TTCAAGTGCTCTG
NTCAAGTGG----
 A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A G T C A G C T A G T C A G C T A C T G
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TTCAAGTGCTCTG
NTCAAGTGGN---
 A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A G T C A G C T A G T C A G C T A C T G
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:3
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----TTCAAGTGCTCTG
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A G T C A G C T A G T C A G C T A C T G
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

PH0114.1_Nkx2-5/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTCAAGTGCTCTG
AAATTCAAGTGGNTTN
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A G T C A G C T A G T C A G C T A C T G
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTCAAGTGCTCTG
CTYRAGTGSY---
 A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A G T C A G C T A G T C A G C T A C T G
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTCAAGTGCTCTG
AANTTCAAGTGGCTTN
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A G T C A G C T A G T C A G C T A C T G
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

PH0113.1_Nkx2-4/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTCAAGTGCTCTG
AATTTCAAGTGGCTTN
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A G T C A G C T A G T C A G C T A C T G
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTCAAGTGCTCTG
BTBRAGTGSN---
 A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A G T C A G C T A G T C A G C T A C T G
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTCAAGTGCTCTG
-TTGAGTGSTT--
 A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A G T C A G C T A G T C A G C T A C T G
A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T

PH0116.1_Nkx2-9/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTCAAGTGCTCTG--
NATTTAAGTACTTNAAA
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A G T C A G C T A G T C A G C T A C T G A C G T A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A