Information for 2-GTGTCTYATT (Motif 5)

C T A G C G A T A T C G A G C T T A G C C G A T A G C T G T C A C G A T C A G T
Reverse Opposite:
G T C A C G T A A C G T T C G A C G T A A T C G C T G A T A G C G C T A G A T C
p-value:1e-17
log p-value:-4.143e+01
Information Content per bp:1.609
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets53.6 +/- 23.0bp
Average Position of motif in Background49.7 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTGTCTYATT--
GKVTCADRTTWC
 C T A G C G A T A T C G A G C T T A G C C G A T A G C T G T C A C G A T C A G T A C G T A C G T
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

PB0119.1_Foxa2_2/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GTGTCTYATT---
NCNTTTGTTATTTNN
 A C G T A C G T C T A G C G A T A T C G A G C T T A G C C G A T A G C T G T C A C G A T C A G T A C G T A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

PH0164.1_Six4/Jaspar

Match Rank:3
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GTGTCTYATT-
TNNNNGGTGTCATNTNT
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G A T A T C G A G C T T A G C C G A T A G C T G T C A C G A T C A G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:4
Score:0.53
Offset:-7
Orientation:reverse strand
Alignment:-------GTGTCTYATT
NTNNNAGGAGTCTCNTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G A T A T C G A G C T T A G C C G A T A G C T G T C A C G A T C A G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

JUND/MA0491.1/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GTGTCTYATT
GGTGACTCATC
 A C G T C T A G C G A T A T C G A G C T T A G C C G A T A G C T G T C A C G A T C A G T
C T A G T C A G A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T T A G C

PB0106.1_Arid5a_2/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GTGTCTYATT-----
TNNTTTCGTATTNNANN
 A C G T A C G T C T A G C G A T A T C G A G C T T A G C C G A T A G C T G T C A C G A T C A G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GTGTCTYATT--
GKMTCADRTTWC
 C T A G C G A T A T C G A G C T T A G C C G A T A G C T G T C A C G A T C A G T A C G T A C G T
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GTGTCTYATT--
--GTCACATGAY
 C T A G C G A T A T C G A G C T T A G C C G A T A G C T G T C A C G A T C A G T A C G T A C G T
A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

BATF::JUN/MA0462.1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GTGTCTYATT
TGAGTCATTTC
 A C G T C T A G C G A T A T C G A G C T T A G C C G A T A G C T G T C A C G A T C A G T
C G A T A C T G C G T A A T C G A C G T G T A C C G T A C A G T G C A T G A C T G A T C

JDP2/MA0655.1/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GTGTCTYATT
ATGAGTCAT---
 A C G T A C G T C T A G C G A T A T C G A G C T T A G C C G A T A G C T G T C A C G A T C A G T
C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T A C G T A C G T A C G T