Information for 19-AAGCTATTAT (Motif 35)

G C T A C G T A C A T G A T G C A G C T T C G A A G C T G A C T C G T A A G C T
Reverse Opposite:
T C G A G C A T C G T A T C G A A G C T C T G A A T C G G T A C G C A T C A G T
p-value:1e-10
log p-value:-2.395e+01
Information Content per bp:1.664
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets47.2 +/- 22.7bp
Average Position of motif in Background29.0 +/- 9.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AAGCTATTAT
AAACMATTAN
 G C T A C G T A C A T G A T G C A G C T T C G A A G C T G A C T C G T A A G C T
T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G

PB0135.1_Hoxa3_2/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AAGCTATTAT--
AAAAACCATTAAGG
 A C G T A C G T G C T A C G T A C A T G A T G C A G C T T C G A A G C T G A C T C G T A A G C T A C G T A C G T
T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

PAX7/MA0680.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AAGCTATTAT
TAATCGATTA-
 A C G T G C T A C G T A C A T G A T G C A G C T T C G A A G C T G A C T C G T A A G C T
C G A T T G C A G T C A G A C T A G T C T C A G C G T A C G A T G A C T G C T A A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AAGCTATTAT
TAATCAATTA-
 A C G T G C T A C G T A C A T G A T G C A G C T T C G A A G C T G A C T C G T A A G C T
C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A A C G T

PAX3/MA0780.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAGCTATTAT
TAATCGATTA-
 A C G T G C T A C G T A C A T G A T G C A G C T T C G A A G C T G A C T C G T A A G C T
C G A T T C G A G T C A A G C T A G T C T C A G C T G A A C G T G A C T G C T A A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AAGCTATTAT-
-NNCAATTANN
 G C T A C G T A C A T G A T G C A G C T T C G A A G C T G A C T C G T A A G C T A C G T
A C G T T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C

PH0006.1_Barhl2/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AAGCTATTAT---
AAAAACCAATTAAGAA
 A C G T A C G T A C G T G C T A C G T A C A T G A T G C A G C T T C G A A G C T G A C T C G T A A G C T A C G T A C G T A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

VENTX/MA0724.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AAGCTATTAT
-ACCGATTAG
 G C T A C G T A C A T G A T G C A G C T T C G A A G C T G A C T C G T A A G C T
A C G T C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G

Hmx1/MA0896.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAGCTATTAT-----
ACAAGCAATTAATGAAT
 A C G T A C G T G C T A C G T A C A T G A T G C A G C T T C G A A G C T G A C T C G T A A G C T A C G T A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAGCTATTAT-----
ACAAGCAATTAATGAAT
 A C G T A C G T G C T A C G T A C A T G A T G C A G C T T C G A A G C T G A C T C G T A A G C T A C G T A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T