Information for 3-GCAAGAGTCCTTT (Motif 3)

A C T G T A G C G T C A C G T A C T A G C G T A C A T G A C G T A G T C A G T C A C G T C G A T A C G T
Reverse Opposite:
T C G A C G T A C G T A C T A G A C T G T G C A G T A C A C G T A G T C G C A T A C G T A T C G A G T C
p-value:1e-21
log p-value:-4.921e+01
Information Content per bp:1.770
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.80%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.9 +/- 24.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PROX1/MA0794.1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCAAGAGTCCTTT
-CAAGACGCCTTA
 A C T G T A G C G T C A C G T A C T A G C G T A C A T G A C G T A G T C A G T C A C G T C G A T A C G T
A C G T A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A

NFE2/MA0841.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCAAGAGTCCTTT
-GATGAGTCATN-
 A C T G T A G C G T C A C G T A C T A G C G T A C A T G A C G T A G T C A G T C A C G T C G A T A C G T
A C G T T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G A C G T

JDP2/MA0655.1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCAAGAGTCCTTT
--ATGAGTCAT--
 A C T G T A G C G T C A C G T A C T A G C G T A C A T G A C G T A G T C A G T C A C G T C G A T A C G T
A C G T A C G T C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCAAGAGTCCTTT---
TACGAGACTCCTCTAAC
 A C G T A C T G T A G C G T C A C G T A C T A G C G T A C A T G A C G T A G T C A G T C A C G T C G A T A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GCAAGAGTCCTTT
-----AGGCCTNG
 A C T G T A G C G T C A C G T A C T A G C G T A C A T G A C G T A G T C A G T C A C G T C G A T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

JUND/MA0491.1/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GCAAGAGTCCTTT
-NATGAGTCACN-
 A C T G T A G C G T C A C G T A C T A G C G T A C A T G A C G T A G T C A G T C A C G T C G A T A C G T
A C G T A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GCAAGAGTCCTTT--
---AGGVNCCTTTGT
 A C T G T A G C G T C A C G T A C T A G C G T A C A T G A C G T A G T C A G T C A C G T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

BATF::JUN/MA0462.1/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GCAAGAGTCCTTT-
---TGAGTCATTTC
 A C T G T A G C G T C A C G T A C T A G C G T A C A T G A C G T A G T C A G T C A C G T C G A T A C G T A C G T
A C G T A C G T A C G T C G A T A C T G C G T A A T C G A C G T G T A C C G T A C A G T G C A T G A C T G A T C

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:GCAAGAGTCCTTT--------
-----ANTCCTTTGTCTNNNN
 A C T G T A G C G T C A C G T A C T A G C G T A C A T G A C G T A G T C A G T C A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

JUN(var.2)/MA0489.1/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:GCAAGAGTCCTTT---
--ATGAGTCATNTNNT
 A C T G T A G C G T C A C G T A C T A G C G T A C A T G A C G T A G T C A G T C A C G T C G A T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A A C G T A C T G C G T A T A C G C G A T A G T C C G T A A G C T G A T C G A C T G A T C G A T C G A C T