Information for 16-GCACTCTGTA (Motif 29)

A C T G T A G C G C T A A T G C G C A T A G T C C G A T A T C G G A C T C T G A
Reverse Opposite:
G A C T C T G A T A G C C G T A C T A G C G T A T A C G C G A T A T C G T G A C
p-value:1e-12
log p-value:-2.896e+01
Information Content per bp:1.664
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.25%
Number of Background Sequences with motif16.6
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets49.6 +/- 29.6bp
Average Position of motif in Background47.4 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GCACTCTGTA
---CTTTGT-
 A C T G T A G C G C T A A T G C G C A T A G T C C G A T A T C G G A C T C T G A
A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GCACTCTGTA
----GCTGTG
 A C T G T A G C G C T A A T G C G C A T A G T C C G A T A T C G G A C T C T G A
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCACTCTGTA----
TGGACTTTGNNCTCN
 A C G T A C T G T A G C G C T A A T G C G C A T A G T C C G A T A T C G G A C T C T G A A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCACTCTGTA-----
TGGACTTTGNNCTNTG
 A C G T A C T G T A G C G C T A A T G C G C A T A G T C C G A T A T C G G A C T C T G A A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCACTCTGTA
AGGVNCCTTTGT-
 A C G T A C G T A C G T A C T G T A G C G C T A A T G C G C A T A G T C C G A T A T C G G A C T C T G A
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCACTCTGTA------
AGGACGCTGTAAAGGGA
 A C G T A C T G T A G C G C T A A T G C G C A T A G T C C G A T A T C G G A C T C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCACTCTGTA
MRSCACTYAA--
 A C G T A C G T A C T G T A G C G C T A A T G C G C A T A G T C C G A T A T C G G A C T C T G A
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCACTCTGTA------
AAGACGCTGTAAAGCGA
 A C G T A C T G T A G C G C T A A T G C G C A T A G T C C G A T A T C G G A C T C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCACTCTGTA------
AAGACGCTGTAAAGCGA
 A C G T A C T G T A G C G C T A A T G C G C A T A G T C C G A T A T C G G A C T C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCACTCTGTA
VBSYGTCTGG-
 A C G T A C T G T A G C G C T A A T G C G C A T A G T C C G A T A T C G G A C T C T G A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T