Information for 17-AGCTCAGTGCCCT (Motif 28)

C T G A A C T G A G T C G C A T G T A C C T G A A C T G G C A T A C T G G A T C G T A C A T G C G C A T
Reverse Opposite:
C G T A T A C G A C T G C T A G T A G C C G T A T G A C G A C T C A T G C G T A T A C G A G T C G A C T
p-value:1e-13
log p-value:-3.030e+01
Information Content per bp:1.663
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets56.5 +/- 24.9bp
Average Position of motif in Background52.0 +/- 14.3bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AGCTCAGTGCCCT-
AGGTCANTGACCTN
 C T G A A C T G A G T C G C A T G T A C C T G A A C T G G C A T A C T G G A T C G T A C A T G C G C A T A C G T
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGCTCAGTGCCCT
-RGTTAGTGCCCY
 C T G A A C T G A G T C G C A T G T A C C T G A A C T G G C A T A C T G G A T C G T A C A T G C G C A T
A C G T C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGCTCAGTGCCCT
-GGTTAGAGACCT
 C T G A A C T G A G T C G C A T G T A C C T G A A C T G G C A T A C T G G A T C G T A C A T G C G C A T
A C G T C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGCTCAGTGCCCT
NGCTN--------
 C T G A A C T G A G T C G C A T G T A C C T G A A C T G G C A T A C T G G A T C G T A C A T G C G C A T
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:5
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----AGCTCAGTGCCCT--
NNNTGAACTCNNTGACCTCN
 A C G T A C G T A C G T A C G T A C G T C T G A A C T G A G T C G C A T G T A C C T G A A C T G G C A T A C T G G A T C G T A C A T G C G C A T A C G T A C G T
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGCTCAGTGCCCT--
TGACCCAGTGACCTAC
 A C G T C T G A A C T G A G T C G C A T G T A C C T G A A C T G G C A T A C T G G A T C G T A C A T G C G C A T A C G T A C G T
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AGCTCAGTGCCCT
-GCTCCG------
 C T G A A C T G A G T C G C A T G T A C C T G A A C T G G C A T A C T G G A T C G T A C A T G C G C A T
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AGCTCAGTGCCCT
-GCTCGGSCTC--
 C T G A A C T G A G T C G C A T G T A C C T G A A C T G G C A T A C T G G A T C G T A C A T G C G C A T
A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:AGCTCAGTGCCCT-
------GTGACCTT
 C T G A A C T G A G T C G C A T G T A C C T G A A C T G G C A T A C T G G A T C G T A C A T G C G C A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

ESR2/MA0258.2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AGCTCAGTGCCCT
AGGNCANNGTGACCT
 A C G T A C G T C T G A A C T G A G T C G C A T G T A C C T G A A C T G G C A T A C T G G A T C G T A C A T G C G C A T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T