Information for 15-CCCGTTGGCTGCA (Motif 26)

A T G C G T A C G A T C A T C G A C G T A C G T T A C G A T C G T A G C G C A T A T C G A T G C T G C A
Reverse Opposite:
A C G T A T C G T A G C C G T A A C T G T A G C A G T C T G C A T G C A T A G C C T A G C A T G T A C G
p-value:1e-13
log p-value:-3.030e+01
Information Content per bp:1.540
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets51.2 +/- 23.0bp
Average Position of motif in Background51.3 +/- 5.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCCGTTGGCTGCA
TGCCCCCGGGCA---
 A C G T A C G T A T G C G T A C G A T C A T C G A C G T A C G T T A C G A T C G T A G C G C A T A T C G A T G C T G C A
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCCGTTGGCTGCA
TCACCTCTGGGCAG--
 A C G T A C G T A C G T A T G C G T A C G A T C A T C G A C G T A C G T T A C G A T C G T A G C G C A T A T C G A T G C T G C A
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCCGTTGGCTGCA
NTGCCCTTGGGCGN--
 A C G T A C G T A C G T A T G C G T A C G A T C A T C G A C G T A C G T T A C G A T C G T A G C G C A T A T C G A T G C T G C A
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CCCGTTGGCTGCA
----TWGTCTGV-
 A T G C G T A C G A T C A T C G A C G T A C G T T A C G A T C G T A G C G C A T A T C G A T G C T G C A
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCCGTTGGCTGCA
CCCCCTTGGGCCCC-
 A C G T A C G T A T G C G T A C G A T C A T C G A C G T A C G T T A C G A T C G T A G C G C A T A T C G A T G C T G C A
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCCGTTGGCTGCA
TGCCCCAGGGCA---
 A C G T A C G T A T G C G T A C G A T C A T C G A C G T A C G T T A C G A T C G T A G C G C A T A T C G A T G C T G C A
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCCGTTGGCTGCA
TGCCCCAGGGCA---
 A C G T A C G T A T G C G T A C G A T C A T C G A C G T A C G T T A C G A T C G T A G C G C A T A T C G A T G C T G C A
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCCGTTGGCTGCA
CCGATTGGCT---
 A T G C G T A C G A T C A T C G A C G T A C G T T A C G A T C G T A G C G C A T A T C G A T G C T G C A
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CCCGTTGGCTGCA
---NTTGGCANN-
 A T G C G T A C G A T C A T C G A C G T A C G T T A C G A T C G T A G C G C A T A T C G A T G C T G C A
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CCCGTTGGCTGCA
----TTGGCA---
 A T G C G T A C G A T C A T C G A C G T A C G T T A C G A T C G T A G C G C A T A T C G A T G C T G C A
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T