Information for 10-HAGAGAGATTTTT (Motif 20)

G C A T C G T A A C T G C G T A T C A G T C G A C T A G C G T A C A G T C G A T G A C T A C G T A C G T
Reverse Opposite:
G T C A G T C A C T G A C G T A G T C A A C G T G A T C A G C T A G T C G A C T T G A C G C A T C G A T
p-value:1e-14
log p-value:-3.318e+01
Information Content per bp:1.642
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.02%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets54.9 +/- 26.5bp
Average Position of motif in Background56.2 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:HAGAGAGATTTTT
--CNGTGATTTN-
 G C A T C G T A A C T G C G T A T C A G T C G A C T A G C G T A C A G T C G A T G A C T A C G T A C G T
A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:HAGAGAGATTTTT-
NTTATTGATTTTTT
 G C A T C G T A A C T G C G T A T C A G T C G A C T A G C G T A C A G T C G A T G A C T A C G T A C G T A C G T
C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T

ONECUT2/MA0756.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:HAGAGAGATTTTT-
ATTATCGATTTTTT
 G C A T C G T A A C T G C G T A T C A G T C G A C T A G C G T A C A G T C G A T G A C T A C G T A C G T A C G T
C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

ONECUT1/MA0679.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:HAGAGAGATTTTT-
ANTATCGATTTTTN
 G C A T C G T A A C T G C G T A T C A G T C G A C T A G C G T A C A G T C G A T G A C T A C G T A C G T A C G T
C T G A C G A T G C A T C T G A C G A T G A T C C T A G T G C A A G C T G A C T C G A T G C A T G A C T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:HAGAGAGATTTTT-----
-GGAAAAATTGTTAGGAA
 G C A T C G T A A C T G C G T A T C A G T C G A C T A G C G T A C A G T C G A T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0146.1_Mafk_2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:HAGAGAGATTTTT--
CCTTGCAATTTTTNN
 G C A T C G T A A C T G C G T A T C A G T C G A C T A G C G T A C A G T C G A T G A C T A C G T A C G T A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

Sox5/MA0087.1/Jaspar

Match Rank:7
Score:0.57
Offset:7
Orientation:forward strand
Alignment:HAGAGAGATTTTT-
-------ATTGTTA
 G C A T C G T A A C T G C G T A T C A G T C G A C T A G C G T A C A G T C G A T G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--HAGAGAGATTTTT
GAAAGTGAAAGT---
 A C G T A C G T G C A T C G T A A C T G C G T A T C A G T C G A C T A G C G T A C A G T C G A T G A C T A C G T A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--HAGAGAGATTTTT
TTGACCGAGAATTCC
 A C G T A C G T G C A T C G T A A C T G C G T A T C A G T C G A C T A G C G T A C A G T C G A T G A C T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

MEF2C/MA0497.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:HAGAGAGATTTTT-----
---TTCTATTTTTAGNNN
 G C A T C G T A A C T G C G T A T C A G T C G A C T A G C G T A C A G T C G A T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T