Information for 11-AGCTCAATTC (Motif 16)

C G T A A C T G T A G C C A G T T G A C T G C A C G T A C G A T C A G T A T G C
Reverse Opposite:
T A C G G C T A G C T A G C A T A C G T A C T G G C T A A T C G G T A C G C A T
p-value:1e-14
log p-value:-3.394e+01
Information Content per bp:1.663
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.35%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets54.0 +/- 25.6bp
Average Position of motif in Background29.6 +/- 18.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0171.1_Sox18_2/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGCTCAATTC-----
GGACTGAATTCATGCC
 A C G T C G T A A C T G T A G C C A G T T G A C T G C A C G T A C G A T C A G T A T G C A C G T A C G T A C G T A C G T A C G T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGCTCAATTC
HNRAATCAAT--
 A C G T A C G T C G T A A C T G T A G C C A G T T G A C T G C A C G T A C G A T C A G T A T G C
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGCTCAATTC
NGCTN-----
 C G T A A C T G T A G C C A G T T G A C T G C A C G T A C G A T C A G T A T G C
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGCTCAATTC
DGATCRATAN
 C G T A A C T G T A G C C A G T T G A C T G C A C G T A C G A T C A G T A T G C
C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C

POU6F2/MA0793.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGCTCAATTC
AGCTCATTAT
 C G T A A C T G T A G C C A G T T G A C T G C A C G T A C G A T C A G T A T G C
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

PB0137.1_Irf3_2/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGCTCAATTC---
NNGCACCTTTCTCC
 A C G T C G T A A C T G T A G C C A G T T G A C T G C A C G T A C G A T C A G T A T G C A C G T A C G T A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGCTCAATTC
TRAGGTCA----
 A C G T A C G T C G T A A C T G T A G C C A G T T G A C T G C A C G T A C G A T C A G T A T G C
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGCTCAATTC-------
-AATCAATTCAATAATT
 C G T A A C T G T A G C C A G T T G A C T G C A C G T A C G A T C A G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGCTCAATTC
AAGGTCAC---
 A C G T C G T A A C T G T A G C C A G T T G A C T G C A C G T A C G A T C A G T A T G C
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T

UNCX/MA0721.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AGCTCAATTC-
---CTAATTAA
 C G T A A C T G T A G C C A G T T G A C T G C A C G T A C G A T C A G T A T G C A C G T
A C G T A C G T A C G T A G T C G A C T C T G A G T C A G A C T G A C T G C T A T C G A