Information for 5-GGCAYGCTGWCCC (Motif 10)

C T A G A C T G A G T C G T C A A G T C A T C G A G T C A C G T A T C G C G T A A G T C A G T C G T A C
Reverse Opposite:
A C T G A C T G A C T G G C A T A T G C C G T A A C T G A T G C C T A G A C G T A C T G A G T C A G T C
p-value:1e-16
log p-value:-3.842e+01
Information Content per bp:1.839
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.80%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets46.4 +/- 28.1bp
Average Position of motif in Background37.2 +/- 14.5bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESR2/MA0258.2/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GGCAYGCTGWCCC
AGGNCANNGTGACCT
 A C G T A C G T C T A G A C T G A G T C G T C A A G T C A T C G A G T C A C G T A T C G C G T A A G T C A G T C G T A C
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GGCAYGCTGWCCC-
GGTCANNGTGACCTN
 A C G T C T A G A C T G A G T C G T C A A G T C A T C G A G T C A C G T A T C G C G T A A G T C A G T C G T A C A C G T
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GGCAYGCTGWCCC------
---NNNNTGACCCGGCGCG
 C T A G A C T G A G T C G T C A A G T C A T C G A G T C A C G T A T C G C G T A A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:GGCAYGCTGWCCC
-------TGACCT
 C T A G A C T G A G T C G T C A A G T C A T C G A G T C A C G T A T C G C G T A A G T C A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGCAYGCTGWCCC
--CCTGCTGAGH-
 C T A G A C T G A G T C G T C A A G T C A T C G A G T C A C G T A T C G C G T A A G T C A G T C G T A C
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

ESR1/MA0112.3/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGCAYGCTGWCCC-
CAGGTCACCGTGACCTT
 A C G T A C G T A C G T C T A G A C T G A G T C G T C A A G T C A T C G A G T C A C G T A T C G C G T A A G T C A G T C G T A C A C G T
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GGCAYGCTGWCCC-
----TGCTGACTCA
 C T A G A C T G A G T C G T C A A G T C A T C G A G T C A C G T A T C G C G T A A G T C A G T C G T A C A C G T
A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:GGCAYGCTGWCCC--
-------TGACCYCT
 C T A G A C T G A G T C G T C A A G T C A T C G A G T C A C G T A T C G C G T A A G T C A G T C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGCAYGCTGWCCC-
NNTCCTGCTGTGNNN
 A C G T C T A G A C T G A G T C G T C A A G T C A T C G A G T C A C G T A T C G C G T A A G T C A G T C G T A C A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGCAYGCTGWCCC--
TGACCCAGTGACCTAC
 A C G T C T A G A C T G A G T C G T C A A G T C A T C G A G T C A C G T A T C G C G T A A G T C A G T C G T A C A C G T A C G T
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C