Information for 1-TMCTTTTWAAHCT (Motif 1)

A C G T G T C A A T G C C G A T A C G T A C G T A C G T C G A T G C T A C G T A G A C T T G A C C G A T
Reverse Opposite:
C G T A A C T G C T G A A C G T C G A T G C T A T G C A C G T A G T C A C G T A A T C G C A G T C G T A
p-value:1e-28
log p-value:-6.549e+01
Information Content per bp:1.678
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.24%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets32.1 +/- 18.9bp
Average Position of motif in Background24.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TMCTTTTWAAHCT
---ATTTGAATT-
 A C G T G T C A A T G C C G A T A C G T A C G T A C G T C G A T G C T A C G T A G A C T T G A C C G A T
A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TMCTTTTWAAHCT-
----TTTGAAACCG
 A C G T G T C A A T G C C G A T A C G T A C G T A C G T C G A T G C T A C G T A G A C T T G A C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TMCTTTTWAAHCT
TTAATGTTTAACC-
 A C G T A C G T G T C A A T G C C G A T A C G T A C G T A C G T C G A T G C T A C G T A G A C T T G A C C G A T
A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TMCTTTTWAAHCT
-CCTTTGATGT--
 A C G T G T C A A T G C C G A T A C G T A C G T A C G T C G A T G C T A C G T A G A C T T G A C C G A T
A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TMCTTTTWAAHCT
--CTTTGT-----
 A C G T G T C A A T G C C G A T A C G T A C G T A C G T C G A T G C T A C G T A G A C T T G A C C G A T
A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----TMCTTTTWAAHCT
NNCATTCATTCATNNN-
 A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G A T A C G T A C G T A C G T C G A T G C T A C G T A G A C T T G A C C G A T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TMCTTTTWAAHCT-
NNTTCCTTTGATCTNNA
 A C G T A C G T A C G T A C G T G T C A A T G C C G A T A C G T A C G T A C G T C G A T G C T A C G T A G A C T T G A C C G A T A C G T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

PB0148.1_Mtf1_2/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TMCTTTTWAAHCT
NNTTTTTCTTATNT
 A C G T A C G T G T C A A T G C C G A T A C G T A C G T A C G T C G A T G C T A C G T A G A C T T G A C C G A T
A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TMCTTTTWAAHCT-
NNTTCCTTTGATCTANA
 A C G T A C G T A C G T A C G T G T C A A T G C C G A T A C G T A C G T A C G T C G A T G C T A C G T A G A C T T G A C C G A T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TMCTTTTWAAHCT
ACTTCCTGTT------
 A C G T A C G T A C G T A C G T G T C A A T G C C G A T A C G T A C G T A C G T C G A T G C T A C G T A G A C T T G A C C G A T
T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T