Information for 1-GTCTATTAGT (Motif 7)

A C T G A C G T T G A C A C G T G T C A A C G T A G C T C T G A A C T G A C G T
Reverse Opposite:
C G T A A G T C A G C T C T G A C G T A A C G T C G T A A C T G C G T A A G T C
p-value:1e-8
log p-value:-1.995e+01
Information Content per bp:1.882
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.58%
Number of Background Sequences with motif23.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets60.8 +/- 29.8bp
Average Position of motif in Background44.0 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA13/MA0650.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTCTATTAGT
TTTTTATTGG-
 A C G T A C T G A C G T T G A C A C G T G T C A A C G T A G C T C T G A A C T G A C G T
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTCTATTAGT
TTTTATKRGG
 A C T G A C G T T G A C A C G T G T C A A C G T A G C T C T G A A C T G A C G T
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTCTATTAGT
NNTGTGGATTSS-
 A C G T A C G T A C G T A C T G A C G T T G A C A C G T G T C A A C G T A G C T C T G A A C T G A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GTCTATTAGT--
NNAATTTTATTGGNTN
 A C G T A C G T A C G T A C G T A C T G A C G T T G A C A C G T G T C A A C G T A G C T C T G A A C T G A C G T A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTCTATTAGT
NTTTTATTGG-
 A C G T A C T G A C G T T G A C A C G T G T C A A C G T A G C T C T G A A C T G A C G T
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTCTATTAGT
NTTTTATTGG-
 A C G T A C T G A C G T T G A C A C G T G T C A A C G T A G C T C T G A A C T G A C G T
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTCTATTAGT
-BCMATTAG-
 A C T G A C G T T G A C A C G T G T C A A C G T A G C T C T G A A C T G A C G T
A C G T A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GTCTATTAGT---
--ATATTAATTAA
 A C T G A C G T T G A C A C G T G T C A A C G T A G C T C T G A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

MEF2A/MA0052.3/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTCTATTAGT---
-TCTATTTTTAGA
 A C T G A C G T T G A C A C G T G T C A A C G T A G C T C T G A A C T G A C G T A C G T A C G T A C G T
A C G T C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTCTATTAGT
TTTTATTRGN
 A C T G A C G T T G A C A C G T G T C A A C G T A G C T C T G A A C T G A C G T
C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A