Information for 4-GGGTCTNTCAATGTCT (Motif 5)

C A T G C T A G A T C G C G A T G A T C C G A T A C T G A C G T A G T C G C T A C T G A A C G T A T C G A C G T A G T C A C G T
Reverse Opposite:
C G T A C T A G G T C A A T G C C G T A A G C T C G A T C T A G C G T A G T A C C G T A C A T G C G T A T A G C A G T C G A T C
p-value:1e-10
log p-value:-2.381e+01
Information Content per bp:1.717
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.58%
Number of Background Sequences with motif12.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets59.6 +/- 28.9bp
Average Position of motif in Background53.9 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:1
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GGGTCTNTCAATGTCT--
--GAAGATCAATCACTAA
 C A T G C T A G A T C G C G A T G A T C C G A T A C T G A C G T A G T C G C T A C T G A A C G T A T C G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GGGTCTNTCAATGTCT---
---ACTATGAATGAATGAT
 C A T G C T A G A T C G C G A T G A T C C G A T A C T G A C G T A G T C G C T A C T G A A C G T A T C G A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:3
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GGGTCTNTCAATGTCT
---ACTTTCACTTTC-
 C A T G C T A G A T C G C G A T G A T C C G A T A C T G A C G T A G T C G C T A C T G A A C G T A T C G A C G T A G T C A C G T
A C G T A C G T A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:4
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GGGTCTNTCAATGTCT
--HNRAATCAAT----
 C A T G C T A G A T C G C G A T G A T C C G A T A C T G A C G T A G T C G C T A C T G A A C G T A T C G A C G T A G T C A C G T
A C G T A C G T G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GGGTCTNTCAATGTCT--
--GAAGATCAATCACTTA
 C A T G C T A G A T C G C G A T G A T C C G A T A C T G A C G T A G T C G C T A C T G A A C G T A T C G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GGGTCTNTCAATGTCT-
-------CCATTGTTTT
 C A T G C T A G A T C G C G A T G A T C C G A T A C T G A C G T A G T C G C T A C T G A A C G T A T C G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GGGTCTNTCAATGTCT
---AGTTTCAGTTTC-
 C A T G C T A G A T C G C G A T G A T C C G A T A C T G A C G T A G T C G C T A C T G A A C G T A T C G A C G T A G T C A C G T
A C G T A C G T A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GGGTCTNTCAATGTCT
AAGCACCTGTCAATAT--
 A C G T A C G T C A T G C T A G A T C G C G A T G A T C C G A T A C T G A C G T A G T C G C T A C T G A A C G T A T C G A C G T A G T C A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:9
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GGGTCTNTCAATGTCT
----NTGTCAN-----
 C A T G C T A G A T C G C G A T G A T C C G A T A C T G A C G T A G T C G C T A C T G A A C G T A T C G A C G T A G T C A C G T
A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GGGTCTNTCAATGTCT
---ACTTTCACTTTC-
 C A T G C T A G A T C G C G A T G A T C C G A T A C T G A C G T A G T C G C T A C T G A A C G T A T C G A C G T A G T C A C G T
A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C A C G T