Information for 1-GMKMTKTYSCAGG (Motif 4)

A C T G G T C A C A G T G T A C A C G T A C T G A C G T A G C T A T C G A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G A T G C C T G A G T C A G T A C C G T A A C T G G T C A A C G T A G T C
p-value:1e-10
log p-value:-2.433e+01
Information Content per bp:1.824
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.58%
Number of Background Sequences with motif11.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets25.8 +/- 16.5bp
Average Position of motif in Background51.7 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GMKMTKTYSCAGG
---HTTTCCCASG
 A C T G G T C A C A G T G T A C A C G T A C T G A C G T A G C T A T C G A G T C C G T A A C T G A C T G
A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GMKMTKTYSCAGG
---CTGTTCCTGG
 A C T G G T C A C A G T G T A C A C G T A C T G A C G T A G C T A T C G A G T C C G T A A C T G A C T G
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

NFATC2/MA0152.1/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GMKMTKTYSCAGG
----TTTTCCA--
 A C T G G T C A C A G T G T A C A C G T A C T G A C G T A G C T A T C G A G T C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GMKMTKTYSCAGG-
TGACANARRCCAGRC
 A C G T A C T G G T C A C A G T G T A C A C G T A C T G A C G T A G C T A T C G A G T C C G T A A C T G A C T G A C G T
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.57
Offset:8
Orientation:forward strand
Alignment:GMKMTKTYSCAGG-----
--------VCAGGTRDRY
 A C T G G T C A C A G T G T A C A C G T A C T G A C G T A G C T A T C G A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:GMKMTKTYSCAGG----
-------NNCAGGTGNN
 A C T G G T C A C A G T G T A C A C G T A C T G A C G T A G C T A T C G A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GMKMTKTYSCAGG---
-NNNCTTTCCAGGAAA
 A C T G G T C A C A G T G T A C A C G T A C T G A C G T A G C T A T C G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GMKMTKTYSCAGG--
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T A C G T A C T G G T C A C A G T G T A C A C G T A C T G A C G T A G C T A T C G A G T C C G T A A C T G A C T G A C G T A C G T
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GMKMTKTYSCAGG--
AAGGKGRCGCAGGCA
 A C T G G T C A C A G T G T A C A C G T A C T G A C G T A G C T A T C G A G T C C G T A A C T G A C T G A C G T A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GMKMTKTYSCAGG
---ATTTTCCATT
 A C T G G T C A C A G T G T A C A C G T A C T G A C G T A G C T A T C G A G T C C G T A A C T G A C T G
A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T