Information for 3-TTAGGAGGTAYKRTCT (Motif 3)

A G C T A G C T C G T A A C T G A T C G C G T A A C T G C A T G A C G T C G T A A G T C C A T G C T G A C A G T A T G C A C G T
Reverse Opposite:
C G T A A T C G G C T A G A C T G T A C T C A G C G A T G T C A G A T C G T A C A C G T A T G C A G T C C G A T T C G A C T G A
p-value:1e-10
log p-value:-2.456e+01
Information Content per bp:1.665
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.72%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.2 +/- 30.1bp
Average Position of motif in Background36.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TTAGGAGGTAYKRTCT
CTACTAGGATGTNNTN---
 A C G T A C G T A C G T A G C T A G C T C G T A A C T G A T C G C G T A A C T G C A T G A C G T C G T A A G T C C A T G C T G A C A G T A T G C A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C A C G T A C G T A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:2
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TTAGGAGGTAYKRTCT
GCTGGGGGGTACCCCTT
 A C G T A G C T A G C T C G T A A C T G A T C G C G T A A C T G C A T G A C G T C G T A A G T C C A T G C T G A C A G T A T G C A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

PB0125.1_Gata3_2/Jaspar

Match Rank:3
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TTAGGAGGTAYKRTCT------
NNNNNCGATANNATCTNNNNAN
 A G C T A G C T C G T A A C T G A T C G C G T A A C T G C A T G A C G T C G T A A G T C C A T G C T G A C A G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C G T A C G T A T A C G A G C T G A T C C T A G T C G A A G C T C T G A T G C A C G T A C T G A C A G T G A T C C G A T T C G A A G T C G C T A C G T A T G C A C T G A

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:4
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:TTAGGAGGTAYKRTCT-
--AGATGCTRCTRCCHT
 A G C T A G C T C G T A A C T G A T C G C G T A A C T G C A T G A C G T C G T A A G T C C A T G C T G A C A G T A T G C A C G T A C G T
A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

TBX5/MA0807.1/Jaspar

Match Rank:5
Score:0.48
Offset:2
Orientation:forward strand
Alignment:TTAGGAGGTAYKRTCT
--AGGTGTGA------
 A G C T A G C T C G T A A C T G A T C G C G T A A C T G C A T G A C G T C G T A A G T C C A T G C T G A C A G T A T G C A C G T
A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:TTAGGAGGTAYKRTCT------
--NDBAGATRWTATCTVNNNNN
 A G C T A G C T C G T A A C T G A T C G C G T A A C T G C A T G A C G T C G T A A G T C C A T G C T G A C A G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C A G T A T G C C G T A A C T G C G T A A C G T T C G A G C T A G A C T C G T A A C G T A G T C C G A T T A C G G C A T A G C T G A T C G A C T G A C T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:7
Score:0.48
Offset:0
Orientation:forward strand
Alignment:TTAGGAGGTAYKRTCT
GGAGGGGGAA------
 A G C T A G C T C G T A A C T G A T C G C G T A A C T G C A T G A C G T C G T A A G T C C A T G C T G A C A G T A T G C A C G T
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

ZBTB7B/MA0694.1/Jaspar

Match Rank:8
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:TTAGGAGGTAYKRTCT
TTCGGTGGTCGC----
 A G C T A G C T C G T A A C T G A T C G C G T A A C T G C A T G A C G T C G T A A G T C C A T G C T G A C A G T A T G C A C G T
C A G T C G A T A G T C C T A G C A T G C A G T A T C G A C T G C A G T G A T C A T C G G A T C A C G T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:9
Score:0.47
Offset:2
Orientation:forward strand
Alignment:TTAGGAGGTAYKRTCT
--AGGTGTGA------
 A G C T A G C T C G T A A C T G A T C G C G T A A C T G C A T G A C G T C G T A A G T C C A T G C T G A C A G T A T G C A C G T
A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.47
Offset:2
Orientation:forward strand
Alignment:TTAGGAGGTAYKRTCT
--AGGTGTCA------
 A G C T A G C T C G T A A C T G A T C G C G T A A C T G C A T G A C G T C G T A A G T C C A T G C T G A C A G T A T G C A C G T
A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T