Information for 13-CCTCCACTGAACTCTA (Motif 22)

A G T C A G T C A C G T A G T C A G T C C G T A A G T C A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G C G T A A C T G A C G T A C G T A G T C C G T A A C T G A C G T A C T G A C T G C G T A A C T G A C T G
p-value:1e-2
log p-value:-5.340e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets9.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCTCCACTGAACTCTA
-ATCCAC---------
 A G T C A G T C A C G T A G T C A G T C C G T A A G T C A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C G T C G T A
A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCTCCACTGAACTCTA
AATCGCACTGCATTCCG
 A C G T A G T C A G T C A C G T A G T C A G T C C G T A A G T C A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C G T C G T A
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0005.1_Bbx_1/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CCTCCACTGAACTCTA
NANTTCATTGAATTA--
 A C G T A G T C A G T C A C G T A G T C A G T C C G T A A G T C A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C G T C G T A
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A A C G T A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCTCCACTGAACTCTA
TAAGCCACTTAACATT-
 A C G T A G T C A G T C A C G T A G T C A G T C C G T A A G T C A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C G T C G T A
C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCTCCACTGAACTCTA
CTTAACCACTTAAGGAT-
 A C G T A C G T A G T C A G T C A C G T A G T C A G T C C G T A A G T C A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C G T C G T A
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CCTCCACTGAACTCTA
--NSCACTYVAV----
 A G T C A G T C A C G T A G T C A G T C C G T A A G T C A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C G T C G T A
A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CCTCCACTGAACTCTA
--ACCACTTAA-----
 A G T C A G T C A C G T A G T C A G T C C G T A A G T C A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C G T C G T A
A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T

Stat6/MA0520.1/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CCTCCACTGAACTCTA
CATTTCCTGAGAAAT---
 A C G T A C G T A G T C A G T C A C G T A G T C A G T C C G T A A G T C A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C G T C G T A
A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CCTCCACTGAACTCTA
--ACCACTTAA-----
 A G T C A G T C A C G T A G T C A G T C C G T A A G T C A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C G T C G T A
A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CCTCCACTGAACTCTA
---CNNTTGACCTTTG
 A G T C A G T C A C G T A G T C A G T C C G T A A G T C A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C G T C G T A
A C G T A C G T A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G